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  5. Cpa|evm.model.tig00000900.16

Cpa|evm.model.tig00000900.16 (tig00000900_g5370.t1)


Aliases : tig00000900_g5370.t1

Description : Carboxyl-terminal-processing peptidase 2, chloroplastic OS=Arabidopsis thaliana


Gene families : OG_01_0000478 (OrthoFinder) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000900.16
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Dusal.1339s00002.1 33199750 Tail specific protease; PDZ domain 6 [Interproscan]. 0.02 OrthoFinder
OT_01G00750.1 No alias PDZ domain 6; Tail specific protease [Interproscan]. 0.02 OrthoFinder
Sro143_g066760.1 Contig3754.g28782 CtpA-like serine protease 0.01 OrthoFinder
Sro3214_g345410.1 Contig3122.g24805 Carboxyl-terminal-processing peptidase 0.03 OrthoFinder
Transcript_contig_58058 58058 PDZ domain 6; Tail specific protease [Interproscan]. 0.03 OrthoFinder
Vocar.0002s0139.1 32890837 PDZ domain 6; Tail specific protease [Interproscan]. 0.02 OrthoFinder
Vocar.0016s0059.1 32898011 PDZ domain 6; Tail specific protease [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004222 metalloendopeptidase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008237 metallopeptidase activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR041489 PDZ_6 239 289
IPR005151 Tail-specific_protease 328 487
No external refs found!