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  5. Transcript_contig_79948

Transcript_contig_79948 (79948)


Aliases : 79948

Description : Ribosomal protein S26e [Interproscan].


Gene families : OG_01_0002849 (OrthoFinder) Phylogenetic Tree(s): OG0002849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_79948
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001486.9 tig00001486_g8926.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder
Cre16.g682300 30776938, RPS26 Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder
Cz08g12070.t1 No alias Ribosomal protein S26e [Interproscan]. 0.04 OrthoFinder
Dusal.0032s00020.1 33186664 Ribosomal protein S26e [Interproscan]. 0.02 OrthoFinder
EOD22215 No alias Ribosomal protein S26e [Interproscan]. 0.02 OrthoFinder
OT_02G02540.1 No alias Ribosomal protein S26e [Interproscan]. 0.05 OrthoFinder
PTI_21G00830.1 No alias Ribosomal protein S26e [Interproscan]. 0.01 OrthoFinder
Sro1334_g263860.1 Contig785.g8790 40S ribosomal protein S26 0.05 OrthoFinder
SymbC1.scaffold913.4 913.4 Ribosomal protein S26e [Interproscan]. 0.03 OrthoFinder
Vocar.0018s0140.1 32898717 Ribosomal protein S26e [Interproscan]. 0.01 OrthoFinder
XM_002504425.1 MICPUN_61082, 61082 Ribosomal protein S26e [Interproscan]. 0.04 OrthoFinder
XM_003059864.1 MicpuC2_27736, 27736 Ribosomal protein S26e [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0004749 ribose phosphate diphosphokinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
BP GO:0009116 nucleoside metabolic process IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016778 diphosphotransferase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901657 glycosyl compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 1 102
No external refs found!