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  5. Transcript_contig_79832

Transcript_contig_79832 (79832)


Aliases : 79832

Description : NodB homology domain [Interproscan].


Gene families : OG_01_0001088 (OrthoFinder) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_79832
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
Cre17.g698150 30782820 No description available 0.02 OrthoFinder
Transcript_contig_54115 54115 Cyclin, N-terminal; Cyclin, C-terminal domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56031 56031 NodB homology domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_56511 56511 LysM domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61361.1_387 PRW61361 Left border a 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61372.1_25 PRW61372 Polysaccharide deacetylase 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61614.1_423 PRW61614 Chitin 0.04 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56282.1_10029 PRW56282 NodB homology domain [Interproscan]. 0.04 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39180.1_2682 PRW39180 NodB homology domain [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Enrichment
MF GO:0005381 iron ion transmembrane transporter activity IEP Enrichment
BP GO:0006812 cation transport IEP Enrichment
BP GO:0006826 iron ion transport IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
CC GO:0033573 high-affinity iron permease complex IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0034755 iron ion transmembrane transport IEP Enrichment
MF GO:0046873 metal ion transmembrane transporter activity IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
CC GO:1905862 ferroxidase complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
InterPro domains Description Start Stop
IPR002509 NODB_dom 37 161
No external refs found!