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  5. Transcript_contig_79358

Transcript_contig_79358 (79358)


Aliases : 79358

Description : Nitrite/Sulfite reductase ferredoxin-like domain; Nitrite/sulphite reductase 4Fe-4S domain [Interproscan].


Gene families : OG_01_0002779 (OrthoFinder) Phylogenetic Tree(s): OG0002779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_79358
Cluster HCCA: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020941.42 tig00020941_g16234.t1 Ferredoxin--nitrite reductase, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00020941.43 tig00020941_g16234.t1 Ferredoxin--nitrite reductase, chloroplastic... 0.03 OrthoFinder
Cre09.g410750 30780283, NII1 Nutrient uptake.nitrogen assimilation.nitrate... 0.06 OrthoFinder
Cz12g08110.t1 No alias Nitrite/sulphite reductase 4Fe-4S domain;... 0.06 OrthoFinder
Dusal.0498s00010.1 33193561 Nitrite/Sulfite reductase ferredoxin-like domain;... 0.03 OrthoFinder
Dusal.0498s00011.1 33193568 Nitrite/sulphite reductase 4Fe-4S domain [Interproscan]. 0.02 OrthoFinder
OT_10G00910.1 No alias Nitrite/Sulfite reductase ferredoxin-like domain;... 0.04 OrthoFinder
PTI_09G03500.1 No alias Nitrite/sulphite reductase 4Fe-4S domain;... 0.02 OrthoFinder
Sro70_g038780.1 Contig3352.g26225 Ferredoxin--nitrite reductase, chloroplastic (Fragment) 0.04 OrthoFinder
XM_002507465.1 MICPUN_113259, 113259 Nadh-nitrite reductase (Nii) 0.04 OrthoFinder
XM_003057895.1 MicpuC2_70828, 70828 Nitrite reductase fusion with b5r chloroplast precursor (NII) 0.06 OrthoFinder
lcl|BLLF01001585.1_cds_GFH20159.1_14636 HaLaN_17238, GFH20159 Ferredoxin-nitrite reductase 0.02 OrthoFinder
lcl|LHPG02000020.1_cds_PRW21087.1_4867 PRW21087 Ferredoxin-nitrite reductase 0.02 OrthoFinder
lcl|VRMN01000006.1_cds_KAA8493547.1_4309 KAA8493547 Ferredoxin--nitrite reductase, chloroplastic 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0020037 heme binding IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Enrichment
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Enrichment
MF GO:0004470 malic enzyme activity IEP Enrichment
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Enrichment
BP GO:0005975 carbohydrate metabolic process IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006163 purine nucleotide metabolic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009150 purine ribonucleotide metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009259 ribonucleotide metabolic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016615 malate dehydrogenase activity IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0019637 organophosphate metabolic process IEP Enrichment
BP GO:0019693 ribose phosphate metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030151 molybdenum ion binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072521 purine-containing compound metabolic process IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 2 44
IPR006067 NO2/SO3_Rdtase_4Fe4S_dom 140 250
IPR005117 NiRdtase/SiRdtase_haem-b_fer 66 128
No external refs found!