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  5. Transcript_contig_79199

Transcript_contig_79199 (79199)


Aliases : 79199

Description : ABC transporter-like [Interproscan].


Gene families : OG_01_0000221 (OrthoFinder) Phylogenetic Tree(s): OG0000221_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_79199
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001368.15 tig00001368_g8414.t1 ABC transporter D family member 2, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00021326.43 tig00021326_g20308.t1 Solute transport.primary active transport.ABC... 0.01 OrthoFinder
Cre10.g439000 30790389 Solute transport.primary active transport.ABC... 0.02 OrthoFinder
Dusal.0225s00018.1 33185197 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
OT_11G01140.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.01 OrthoFinder
SymbC1.scaffold2781.3 2781.3 ABC transporter-like; ABC transporter type 1,... 0.01 OrthoFinder
XM_003061400.1 MicpuC2_28602, 28602 ATP-binding cassette superfamily 0.01 OrthoFinder
lcl|BLLF01002518.1_cds_GFH24371.1_18848 HaLaN_22156, GFH24371 ABC transporter domain-containing protein 0.01 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8496848.1_577 KAA8496848 ABC transporter D family member 2, chloroplastic 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004399 histidinol dehydrogenase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
BP GO:0006547 histidine metabolic process IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016791 phosphatase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0042578 phosphoric ester hydrolase activity IEP Enrichment
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
MF GO:0051287 NAD binding IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 38 119
No external refs found!