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Transcript_contig_78974 (78974)


Aliases : 78974

Description : Sodium/calcium exchanger membrane region [Interproscan].


Gene families : OG_01_0000786 (OrthoFinder) Phylogenetic Tree(s): OG0000786_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78974
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Cre16.g683595 30778260, CAX4 Solute transport.carrier-mediated transport.CDF... 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR004837 NaCa_Exmemb 14 105
No external refs found!