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  5. Transcript_contig_78901

Transcript_contig_78901 (78901)


Aliases : 78901

Description : SGNH hydrolase-type esterase domain [Interproscan].


Gene families : OG_01_0000181 (OrthoFinder) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78901
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Cre09.g402923 30780492 No description available 0.01 OrthoFinder
Cre14.g632501 30776308 No description available 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW60976.1_446 PRW60976 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56718.1_9828 PRW56718 Metallo-beta-lactamase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
InterPro domains Description Start Stop
IPR013830 SGNH_hydro 11 216
No external refs found!