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  5. Transcript_contig_78660

Transcript_contig_78660 (78660)


Aliases : 78660

Description : Hypothetical protein


Gene families : OG_01_0000242 (OrthoFinder) Phylogenetic Tree(s): OG0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78660
Cluster HCCA: Cluster_244

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.106 tig00000241_g20970.t1 No description available 0.01 OrthoFinder
Cre03.g166700 30787105, FOR1 Formin-like protein 12 OS=Oryza sativa subsp. japonica 0.01 OrthoFinder
Cre06.g311250 30779791 No description available 0.02 OrthoFinder
EOD03716 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
EOD08287 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
EOD29366 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
EOD38561 No alias Formin, FH2 domain; Formin, FH3 domain [Interproscan]. 0.01 OrthoFinder
OT_06G01350.1 No alias Formin, FH2 domain; Rho GTPase-activating protein domain... 0.02 OrthoFinder
TP04G00680.1 No alias Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
XM_003059141.1 MicpuC2_27253, 27253 Formin, FH2 domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33313.1_3536 PRW33313 Formin 20 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008131 primary amine oxidase activity IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0048038 quinone binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!