Transcript_contig_78579 (78579)


Aliases : 78579

Description : Hypothetical protein


Gene families : OG_01_0000146 (OrthoFinder) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78579
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467768 30775766 Lysine-specific demethylase JMJ30 OS=Arabidopsis thaliana 0.02 OrthoFinder
OT_01G04930.1 No alias Cupin-like domain 8 [Interproscan]. 0.02 OrthoFinder
TP05G03240.1 No alias Cupin-like domain 8 [Interproscan]. 0.01 OrthoFinder
XM_002504299.1 MICPUN_61460, 61460 Cupin-like domain 8 [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56320.1_10356 PRW56320 Lysine-specific demethylase 8 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0004402 histone acetyltransferase activity IEP Enrichment
MF GO:0005244 voltage-gated ion channel activity IEP Enrichment
MF GO:0005247 voltage-gated chloride channel activity IEP Enrichment
MF GO:0005253 anion channel activity IEP Enrichment
MF GO:0005254 chloride channel activity IEP Enrichment
CC GO:0005685 U1 snRNP IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006376 mRNA splice site selection IEP Enrichment
BP GO:0006473 protein acetylation IEP Enrichment
BP GO:0006475 internal protein amino acid acetylation IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006821 chloride transport IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008308 voltage-gated anion channel activity IEP Enrichment
MF GO:0008509 anion transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015698 inorganic anion transport IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
BP GO:0016573 histone acetylation IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
BP GO:0018393 internal peptidyl-lysine acetylation IEP Enrichment
BP GO:0018394 peptidyl-lysine acetylation IEP Enrichment
BP GO:0022618 ribonucleoprotein complex assembly IEP Enrichment
MF GO:0022832 voltage-gated channel activity IEP Enrichment
MF GO:0022836 gated channel activity IEP Enrichment
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Enrichment
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Enrichment
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Enrichment
MF GO:0034212 peptide N-acetyltransferase activity IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
BP GO:0043543 protein acylation IEP Enrichment
MF GO:0046914 transition metal ion binding IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0097525 spliceosomal snRNP complex IEP Enrichment
CC GO:0120114 Sm-like protein family complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!