Transcript_contig_78534 (78534)


Aliases : 78534

Description : Ammonium transporter AmtB-like domain [Interproscan].


Gene families : OG_01_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78534
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
Cre13.g569850 30784754, AMT4 Solute transport.channels.AMT family.ammonium... 0.02 OrthoFinder
Cz03g40260.t1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder
Dusal.0331s00012.1 33192982 Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder
Dusal.1338s00001.1 33196891 Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder
PTI_10G00390.1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
PTI_11G00420.1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.02 OrthoFinder
Sro1209_g252670.1 Contig2883.g23019 Ammonium transporter 1 member 0.01 OrthoFinder
Sro737_g195110.1 Contig1367.g12570 Ammonium transporter 1 member 0.01 OrthoFinder
TP09G01360.1 No alias Ammonium transporter AmtB-like domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000138.1_cds_GFH08110.1_2587 HaLaN_03021, GFH08110 Ammonium transporter 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008519 ammonium transmembrane transporter activity IEA Interproscan
BP GO:0015696 ammonium transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0045735 nutrient reservoir activity IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR024041 NH4_transpt_AmtB-like_dom 29 461
No external refs found!