Transcript_contig_78534 (78534)

Aliases : 78534

Description : Ammonium transporter AmtB-like domain [Interproscan].

Gene families : OG_01_0000094 (OrthoFinder) Phylogenetic Tree(s): OG0000094_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_78534
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
Cre13.g569850	30784754, AMT4	Solute transport.channels.AMT family.ammonium...	0.02	OrthoFinder
Cz03g40260.t1	No alias	Ammonium transporter AmtB-like domain [Interproscan].	0.01	OrthoFinder
Dusal.0331s00012.1	33192982	Ammonium transporter AmtB-like domain [Interproscan].	0.01	OrthoFinder
Dusal.1338s00001.1	33196891	Ammonium transporter AmtB-like domain [Interproscan].	0.01	OrthoFinder
PTI_10G00390.1	No alias	Ammonium transporter AmtB-like domain [Interproscan].	0.02	OrthoFinder
PTI_11G00420.1	No alias	Ammonium transporter AmtB-like domain [Interproscan].	0.02	OrthoFinder
Sro1209_g252670.1	Contig2883.g23019	Ammonium transporter 1 member	0.01	OrthoFinder
Sro737_g195110.1	Contig1367.g12570	Ammonium transporter 1 member	0.01	OrthoFinder
TP09G01360.1	No alias	Ammonium transporter AmtB-like domain [Interproscan].	0.01	OrthoFinder
lcl\|BLLF01000138.1_cds_GFH08110.1_2587	HaLaN_03021, GFH08110	Ammonium transporter	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006812	cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008324	cation transmembrane transporter activity	None	Extended
MF	GO:0008519	ammonium transmembrane transporter activity	IEA	Interproscan
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015696	ammonium transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0022890	inorganic cation transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005216	ion channel activity	IEP	Enrichment
MF	GO:0015267	channel activity	IEP	Enrichment
MF	GO:0016746	acyltransferase activity	IEP	Enrichment
MF	GO:0022803	passive transmembrane transporter activity	IEP	Enrichment
MF	GO:0045735	nutrient reservoir activity	IEP	Enrichment
MF	GO:0046983	protein dimerization activity	IEP	Enrichment
BP	GO:0055085	transmembrane transport	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR024041	NH4_transpt_AmtB-like_dom	29	461

External Links

No external refs found!