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Aliases : 78321
Description : CCAAT-binding factor [Interproscan].
Gene families : OG_01_0002091 (OrthoFinder) Phylogenetic Tree(s): OG0002091_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_78321 | |
| Cluster | HCCA: Cluster_68 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00021293.22 | tig00021293_g20014.t1 | No description available | 0.05 | OrthoFinder | |
| Cpa|evm.model.tig00021293.23 | tig00021293_g20014.t1 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder | |
| Cre10.g459600 | 30790609 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.1 | OrthoFinder | |
| Cz08g12220.t1 | No alias | Hypothetical protein | 0.06 | OrthoFinder | |
| Cz08g12230.t1 | No alias | Hypothetical protein | 0.1 | OrthoFinder | |
| Cz08g12240.t1 | No alias | CCAAT-binding factor [Interproscan]. | 0.11 | OrthoFinder | |
| Dusal.0293s00003.1 | 33190184 | CCAAT-binding factor [Interproscan]. | 0.06 | OrthoFinder | |
| EOD11177 | No alias | CCAAT-binding factor [Interproscan]. | 0.08 | OrthoFinder | |
| EOD19601 | No alias | CCAAT-binding factor [Interproscan]. | 0.02 | OrthoFinder | |
| OT_14G00120.1 | No alias | CCAAT-binding factor [Interproscan]. | 0.04 | OrthoFinder | |
| PTI_33G00080.1 | No alias | CCAAT-binding factor [Interproscan]. | 0.07 | OrthoFinder | |
| Sro381_g130900.1 | Contig161.g1823 | CCAAT/enhancer-binding protein zeta | 0.06 | OrthoFinder | |
| TP01G09110.1 | No alias | CCAAT-binding factor [Interproscan]. | 0.04 | OrthoFinder | |
| Vocar.0020s0188.1 | 32886771 | CCAAT-binding factor [Interproscan]. | 0.03 | OrthoFinder | |
| XM_003063700.1 | MicpuC2_49035, 49035 | CCAAT-binding factor [Interproscan]. | 0.07 | OrthoFinder | |
| lcl|BLLF01000229.1_cds_GFH09368.1_3845 | HaLaN_04490, GFH09368 | CBF domain-containing protein | 0.04 | OrthoFinder | |
| lcl|BLLF01000932.1_cds_GFH16006.1_10483 | HaLaN_12349, GFH16006 | CBF domain-containing protein | 0.02 | OrthoFinder | |
| lcl|BLLF01002098.1_cds_GFH22680.1_17157 | HaLaN_20185, GFH22680 | CBF domain-containing protein | 0.02 | OrthoFinder | |
| lcl|LHPG02000019.1_cds_PRW32482.1_3998 | PRW32482 | CCAAT enhancer-binding zeta | 0.08 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003723 | RNA binding | IEP | Enrichment |
| MF | GO:0003724 | RNA helicase activity | IEP | Enrichment |
| MF | GO:0003746 | translation elongation factor activity | IEP | Enrichment |
| MF | GO:0004000 | adenosine deaminase activity | IEP | Enrichment |
| MF | GO:0004133 | glycogen debranching enzyme activity | IEP | Enrichment |
| MF | GO:0004134 | 4-alpha-glucanotransferase activity | IEP | Enrichment |
| MF | GO:0005488 | binding | IEP | Enrichment |
| MF | GO:0005515 | protein binding | IEP | Enrichment |
| MF | GO:0005524 | ATP binding | IEP | Enrichment |
| MF | GO:0005525 | GTP binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005634 | nucleus | IEP | Enrichment |
| CC | GO:0005730 | nucleolus | IEP | Enrichment |
| CC | GO:0005759 | mitochondrial matrix | IEP | Enrichment |
| BP | GO:0006364 | rRNA processing | IEP | Enrichment |
| BP | GO:0006396 | RNA processing | IEP | Enrichment |
| BP | GO:0006414 | translational elongation | IEP | Enrichment |
| BP | GO:0006457 | protein folding | IEP | Enrichment |
| MF | GO:0008134 | transcription factor binding | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008168 | methyltransferase activity | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| BP | GO:0016072 | rRNA metabolic process | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Enrichment |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Enrichment |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Enrichment |
| MF | GO:0017076 | purine nucleotide binding | IEP | Enrichment |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | Enrichment |
| MF | GO:0019239 | deaminase activity | IEP | Enrichment |
| MF | GO:0019843 | rRNA binding | IEP | Enrichment |
| CC | GO:0019867 | outer membrane | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Enrichment |
| CC | GO:0030684 | preribosome | IEP | Enrichment |
| CC | GO:0031974 | membrane-enclosed lumen | IEP | Enrichment |
| CC | GO:0032040 | small-subunit processome | IEP | Enrichment |
| BP | GO:0032259 | methylation | IEP | Enrichment |
| MF | GO:0032553 | ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Enrichment |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Enrichment |
| BP | GO:0034470 | ncRNA processing | IEP | Enrichment |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Enrichment |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| MF | GO:0043168 | anion binding | IEP | Enrichment |
| CC | GO:0043226 | organelle | IEP | Enrichment |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043229 | intracellular organelle | IEP | Enrichment |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Enrichment |
| CC | GO:0043233 | organelle lumen | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| CC | GO:0070013 | intracellular organelle lumen | IEP | Enrichment |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Enrichment |
| CC | GO:0110165 | cellular anatomical entity | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005612 | CCAAT-binding_factor | 559 | 838 |
| No external refs found! |