Transcript_contig_78032 (78032)


Aliases : 78032

Description : Phosphoribosylaminoimidazole carboxylase, C-terminal domain; ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; PurE domain [Interproscan].


Gene families : OG_01_0002800 (OrthoFinder) Phylogenetic Tree(s): OG0002800_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_78032
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
EOD20945 No alias PurE domain; Phosphoribosylaminoimidazole carboxylase,... 0.01 OrthoFinder
OT_09G00780.1 No alias Phosphoribosylaminoimidazole carboxylase, C-terminal... 0.01 OrthoFinder
Sro447_g144910.1 Contig3064.g24413 Phosphoribosylaminoimidazole carboxylase, chloroplastic... 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006189 'de novo' IMP biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Enrichment
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Enrichment
MF GO:0004826 phenylalanine-tRNA ligase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0016226 iron-sulfur cluster assembly IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
BP GO:0031163 metallo-sulfur cluster assembly IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR000031 PurE_dom 481 628
IPR003135 ATP-grasp_carboxylate-amine 182 353
IPR040686 PurK_C 380 443
No external refs found!