Transcript_contig_7471 (7471)

Aliases : 7471

Description : Symplekin/Pta1, N-terminal [Interproscan].

Gene families : OG_01_0002970 (OrthoFinder) Phylogenetic Tree(s): OG0002970_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_7471
Cluster	HCCA: Cluster_163

Target	Alias	Description	ECC score	Gene Family Method
Cz03g09030.t1	No alias	Symplekin/Pta1, N-terminal; Symplekin C-terminal [Interproscan].	0.02	OrthoFinder
Sro759_g198240.1	Contig608.g7524	Symplekin	0.01	OrthoFinder
XM_002508068.1	MICPUN_60517, 60517	Symplekin/Pta1, N-terminal; Symplekin C-terminal [Interproscan].	0.01	OrthoFinder
lcl\|BLLF01006755.1_cds_GFH32529.1_27006	HaLaN_31763, GFH32529	DUF3453 domain-containing protein	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	IEP	Enrichment
MF	GO:0003676	nucleic acid binding	IEP	Enrichment
MF	GO:0004252	serine-type endopeptidase activity	IEP	Enrichment
MF	GO:0005488	binding	IEP	Enrichment
CC	GO:0005643	nuclear pore	IEP	Enrichment
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	Enrichment
MF	GO:0017056	structural constituent of nuclear pore	IEP	Enrichment
MF	GO:0030246	carbohydrate binding	IEP	Enrichment
MF	GO:0030247	polysaccharide binding	IEP	Enrichment
CC	GO:0032991	protein-containing complex	IEP	Enrichment
MF	GO:0035596	methylthiotransferase activity	IEP	Enrichment
MF	GO:0050497	alkylthioltransferase activity	IEP	Enrichment
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Enrichment
CC	GO:0140513	nuclear protein-containing complex	IEP	Enrichment
MF	GO:2001070	starch binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR032460	Symplekin/Pta1_N	101	263

External Links

No external refs found!