1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000842.25

Cpa|evm.model.tig00000842.25 (tig00000842_g4844.t1)


Aliases : tig00000842_g4844.t1

Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT4 delta subunit


Gene families : OG_01_0002443 (OrthoFinder) Phylogenetic Tree(s): OG0002443_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000842.25
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Cre05.g234639 30783461, CCT4 Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder
Cz08g02120.t1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
EOD26391 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.05 OrthoFinder
OT_06G01020.1 No alias Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
Sro1769_g296510.1 Contig4211.g32041 Thermosome subunit beta (Fragment) 0.05 OrthoFinder
Transcript_contig_55830 55830 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
Vocar.0008s0413.1 32897283 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.03 OrthoFinder
XM_002501784.1 MICPUN_81357, 81357 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.06 OrthoFinder
XM_003059139.1 MicpuC2_47517, 47517 Chaperonin Cpn60/TCP-1 family [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000179.1_cds_GFH08706.1_3183 HaLaN_03717, GFH08706 T-complex protein 1 subunit delta 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56285.1_10299 PRW56285 T-complex 1 subunit delta 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005047 signal recognition particle binding IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005785 signal recognition particle receptor complex IEP Enrichment
BP GO:0006066 alcohol metabolic process IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0007155 cell adhesion IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
BP GO:0016093 polyprenol metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019348 dolichol metabolic process IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0022610 biological adhesion IEP Enrichment
MF GO:0030145 manganese ion binding IEP Enrichment
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP Enrichment
CC GO:0031300 intrinsic component of organelle membrane IEP Enrichment
CC GO:0031301 integral component of organelle membrane IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0043021 ribonucleoprotein complex binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
MF GO:0044877 protein-containing complex binding IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901615 organic hydroxy compound metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 37 539
No external refs found!