Heatmap: Cluster_119 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000025.52 (tig00000025_g7955.t1)
-0.75 -0.7 -0.56 0.05 0.45 0.49 0.48 0.4 0.09 -0.19 -0.16 -0.31 -0.96 -0.15 0.1 0.47 -0.22 0.27 0.21 -0.57 -0.64 0.19 0.6 -0.32 0.29 -0.23
Cpa|evm.model.tig00000042.233 (tig00000042_g15631.t1)
-0.08 -0.02 -0.04 0.01 0.22 0.66 0.64 0.29 0.07 -0.3 -0.61 -0.8 -0.73 -0.28 0.17 0.39 0.03 -0.19 0.37 -0.34 -2.77 -0.81 0.46 -0.4 0.66 0.26
Cpa|evm.model.tig00000157.20 (tig00000157_g9607.t1)
-0.87 0.28 0.12 0.06 0.28 0.28 0.29 0.1 0.03 -0.17 -0.52 -0.86 -1.11 -0.18 0.32 0.37 0.07 0.63 0.48 0.14 -0.98 0.32 0.36 -0.2 -0.42 -0.77
Cpa|evm.model.tig00000227.48 (tig00000227_g19839.t1)
-0.71 -0.81 -0.42 -0.01 -0.25 0.69 0.12 -0.3 -0.5 -0.44 -0.32 0.17 -0.87 0.23 0.03 -0.05 -0.05 0.59 0.32 0.25 -1.19 0.0 0.83 -0.3 0.47 0.41
Cpa|evm.model.tig00000237.12 (tig00000237_g20461.t1)
-3.11 -1.33 -1.04 -0.46 0.42 0.79 0.09 0.03 -0.0 0.25 -0.32 0.03 -2.98 -0.42 -0.47 0.06 -0.12 0.18 0.17 -0.04 -0.35 0.41 1.36 0.85 -0.01 -0.24
Cpa|evm.model.tig00000241.39 (tig00000241_g20897.t1)
-1.73 -0.6 -0.01 -0.09 0.21 0.41 0.05 0.08 -0.07 -0.01 -0.33 -0.42 -2.47 -0.27 -0.03 0.36 0.13 0.16 0.35 0.79 -0.09 -1.52 0.68 0.43 -0.11 0.49
Cpa|evm.model.tig00000246.9 (tig00000246_g21500.t2)
-0.24 -0.53 -0.56 -0.24 -0.33 -0.51 -0.78 -0.43 -0.41 0.1 0.04 -0.07 -0.75 -1.28 -0.37 -1.02 -0.78 0.33 -0.2 -0.11 0.92 0.93 1.37 0.29 0.66 0.28
Cpa|evm.model.tig00000319.29 (tig00000319_g24142.t1)
0.15 0.28 0.03 0.06 0.32 0.55 0.38 0.3 0.22 -0.26 -0.26 -0.34 -0.39 -0.36 -0.46 -0.37 -0.26 0.21 0.03 -0.47 -1.35 0.48 0.41 -0.26 0.15 -0.14
Cpa|evm.model.tig00000385.7 (tig00000385_g24735.t1)
-0.57 -0.63 -0.33 -0.34 0.04 -0.08 0.45 0.13 0.22 -0.04 -0.18 -0.46 -0.68 0.07 0.32 0.25 -0.05 0.4 0.55 0.2 -0.79 -0.15 0.83 -0.17 -0.26 -0.11
Cpa|evm.model.tig00000388.64 (tig00000388_g24826.t1)
-1.23 -0.56 -0.35 -0.34 -0.26 0.17 0.08 -0.16 0.11 0.02 -0.08 0.16 -1.08 0.0 -0.07 0.02 -0.06 0.06 0.04 -0.25 0.4 0.2 0.42 0.38 0.54 0.47
Cpa|evm.model.tig00000402.73 (tig00000402_g250.t1)
-0.27 -0.33 -0.28 -0.08 0.16 0.53 0.49 0.21 0.18 -0.02 -0.3 -0.57 -0.46 -0.35 0.02 -0.17 -0.14 0.22 0.31 0.04 -0.74 0.08 0.71 0.23 -0.22 -0.32
Cpa|evm.model.tig00000405.66 (tig00000405_g497.t1)
-3.89 -2.17 -0.72 -0.3 0.45 0.58 0.83 0.35 0.71 0.3 0.02 -0.23 -2.95 -0.01 -0.3 0.13 0.05 0.66 0.51 0.05 -1.69 0.18 0.55 -0.12 -0.02 -0.46
Cpa|evm.model.tig00000448.83 (tig00000448_g918.t1)
-0.28 -0.61 -0.66 -0.09 0.07 0.22 0.27 0.21 0.18 -0.1 -0.22 -0.32 -0.63 -0.92 -0.72 -0.56 -0.48 0.09 -0.22 -0.24 0.49 0.31 1.09 0.58 0.48 0.05
Cpa|evm.model.tig00000478.16 (tig00000478_g1265.t1)
-2.33 -0.88 -0.69 -0.22 0.49 1.03 0.67 0.23 0.0 -0.9 -1.15 -1.32 -1.87 0.15 -0.09 0.1 0.23 0.57 0.56 0.09 -2.71 0.79 0.34 -0.43 0.71 0.1
Cpa|evm.model.tig00000545.15 (tig00000545_g1988.t1)
-2.69 -0.67 0.08 0.09 0.29 0.4 0.1 0.16 0.15 0.09 -0.14 -0.23 -2.96 0.18 -0.12 0.14 -0.12 0.44 0.4 0.04 -0.18 -0.06 0.26 0.17 0.0 0.44
Cpa|evm.model.tig00000545.9 (tig00000545_g1982.t1)
-1.47 -0.54 -0.64 -0.25 0.41 0.86 0.53 0.28 0.28 0.16 -0.25 -0.6 -1.54 -0.68 -0.18 -0.3 -0.11 0.31 -0.09 0.23 -2.41 0.49 0.36 0.22 0.87 0.02
Cpa|evm.model.tig00000605.2 (tig00000605_g2468.t1)
-1.65 -0.76 -0.11 -0.03 0.08 0.37 0.51 0.31 -0.08 -0.09 -0.18 -0.59 -1.4 0.13 -0.02 0.16 -0.31 0.47 0.49 -0.0 -1.61 0.49 0.86 -0.35 0.43 -0.13
Cpa|evm.model.tig00000615.79 (tig00000615_g2609.t1)
-0.67 -0.05 -0.03 -0.11 0.03 0.08 0.2 0.05 -0.09 -0.3 -0.62 -0.71 -0.84 -0.19 0.21 0.23 0.1 0.76 0.37 0.19 -0.43 -0.02 0.95 -0.12 -0.06 -0.45
Cpa|evm.model.tig00000615.86 (tig00000615_g2614.t1)
-2.65 -3.64 -1.29 -0.03 0.64 0.96 0.69 0.15 0.18 0.24 0.03 -0.04 -1.88 -0.13 -0.11 0.24 0.31 -0.51 -0.55 -0.25 0.09 -0.19 1.07 0.51 -0.23 -0.4
Cpa|evm.model.tig00000691.14 (tig00000691_g3164.t1)
-1.84 -0.27 -0.4 -0.03 0.53 0.54 0.3 0.15 -0.08 -0.45 -0.99 -1.37 -2.89 -0.49 0.38 -0.2 -0.47 0.54 0.4 -0.1 -0.25 0.58 1.15 0.25 0.32 -0.13
Cpa|evm.model.tig00000691.15 (tig00000691_g3164.t1)
-2.57 -0.26 -0.42 0.16 0.32 0.39 0.36 0.03 -0.17 -0.48 -0.94 -1.26 -3.52 -0.36 0.57 0.21 0.14 0.94 0.67 0.04 -0.44 0.41 0.65 -0.13 -0.09 0.11
Cpa|evm.model.tig00000718.48 (tig00000718_g3722.t1)
-1.41 -0.81 -0.42 0.02 0.32 0.64 0.42 0.04 0.32 0.01 -0.55 -0.59 -2.06 -0.12 -0.9 -0.26 -0.4 0.6 0.27 -0.17 -0.04 -0.58 0.71 0.69 0.23 0.64
Cpa|evm.model.tig00000792.61 (tig00000792_g4212.t1)
-0.64 -0.71 -0.45 -0.46 0.02 0.29 0.17 -0.05 -0.04 -0.18 -0.44 -0.33 -0.61 -0.46 -0.55 0.04 -0.11 0.25 -0.1 0.08 0.13 0.57 1.06 0.98 -0.02 -0.44
Cpa|evm.model.tig00000802.23 (tig00000802_g4274.t1)
-1.15 -0.52 -0.48 -0.29 -0.11 -0.04 -0.3 -0.67 -0.47 -0.26 -0.13 -0.03 -1.14 -0.53 -0.28 -0.14 -0.17 0.05 0.03 -0.32 0.61 0.16 0.85 1.71 0.21 0.03
Cpa|evm.model.tig00000842.25 (tig00000842_g4844.t1)
-0.58 -0.12 -0.08 -0.19 0.07 0.06 0.15 0.02 -0.17 -0.31 -0.57 -0.8 -0.76 -0.09 0.18 0.59 -0.02 0.85 0.29 0.03 -0.42 0.53 0.76 -0.12 -0.31 -0.7
Cpa|evm.model.tig00000842.60 (tig00000842_g4881.t1)
-0.89 -0.27 -0.12 0.18 0.4 0.69 0.12 -0.38 -0.02 -0.1 -0.22 -0.26 -0.99 -0.34 -0.09 0.06 -0.04 0.33 0.33 0.19 -1.31 0.29 0.49 0.21 0.1 0.01
Cpa|evm.model.tig00000849.35 (tig00000849_g4776.t1)
-1.18 -0.35 -0.82 -0.04 0.59 1.0 0.71 0.55 -0.21 -0.54 -0.57 -1.2 -1.54 -0.29 -0.06 0.22 -0.56 -0.24 -0.05 -0.17 -0.68 0.66 1.18 -0.23 0.04 -0.11
Cpa|evm.model.tig00000865.31 (tig00000865_g5081.t1)
-0.4 -0.65 -0.46 -0.21 0.34 0.85 0.69 0.4 0.3 -0.07 -0.57 -0.73 -0.43 -0.2 -0.09 -0.08 -0.18 0.19 0.19 0.03 -0.33 -0.93 0.9 0.24 -0.54 -0.31
Cpa|evm.model.tig00000865.35 (tig00000865_g5085.t1)
-1.07 -1.47 -0.33 -0.17 0.09 0.29 -0.02 -0.22 -0.31 0.05 -0.09 0.07 -0.85 -0.77 -0.59 -0.23 -0.2 -0.31 -0.22 0.3 0.04 0.52 1.27 0.71 0.41 0.32
Cpa|evm.model.tig00000912.30 (tig00000912_g5435.t1)
-1.33 -0.51 -0.4 -0.31 0.17 0.35 0.26 0.13 0.05 -0.0 -0.03 -0.11 -1.13 -0.34 -0.33 -0.29 0.05 0.2 0.41 0.27 -0.1 0.31 0.7 0.35 -0.06 0.13
Cpa|evm.model.tig00000989.4 (tig00000989_g6080.t1)
-0.6 0.56 0.24 -0.17 -0.18 -0.33 -0.01 -0.15 -0.52 -0.72 -1.26 -1.62 -1.01 -0.03 0.22 0.61 0.31 1.26 0.85 0.43 -0.94 -0.62 1.26 -0.94 -0.66 -0.97
Cpa|evm.model.tig00001001.13 (tig00001001_g6203.t1)
-0.93 -0.7 -0.3 -0.13 -0.02 0.22 0.81 0.3 0.36 -0.52 -0.46 -1.07 -1.81 0.13 -0.74 0.09 0.08 0.62 0.45 -0.22 -0.56 0.95 0.97 -0.8 0.23 -0.62
Cpa|evm.model.tig00001003.15 (tig00001003_g6272.t1)
-1.08 -0.59 -1.01 0.17 0.61 0.17 0.6 0.45 -0.85 -0.34 -0.53 -1.23 -1.64 -0.77 -0.11 -0.72 0.03 0.45 0.27 0.32 -0.71 -0.4 0.55 0.73 1.12 0.36
Cpa|evm.model.tig00001024.7 (tig00001024_g6317.t1)
-2.11 -1.32 -0.96 -0.73 0.48 1.23 0.96 0.56 0.01 -0.81 -0.81 -1.33 -2.31 -0.81 -0.57 0.61 0.01 -0.08 0.12 -0.11 -0.01 0.14 0.85 0.5 0.47 -0.15
Cpa|evm.model.tig00001029.34 (tig00001029_g6434.t1)
-1.04 -0.63 -0.14 0.13 0.6 0.95 0.58 0.28 0.3 0.23 -0.35 -0.26 -1.31 0.11 -0.05 -0.13 -0.5 0.45 0.17 -0.49 -2.3 -0.03 0.12 0.1 -0.08 0.17
Cpa|evm.model.tig00001049.3 (tig00001049_g6654.t1)
-0.38 -1.53 -2.37 -2.0 -1.0 -0.13 0.47 0.4 0.3 0.46 0.24 -0.08 -0.4 -0.44 -0.79 -0.89 -0.17 0.7 0.14 -0.05 0.58 -0.03 0.38 1.21 0.43 -0.06
Cpa|evm.model.tig00001093.15 (tig00001093_g6892.t1)
-0.64 -0.37 -0.4 -0.14 0.24 0.57 0.4 0.36 0.46 0.1 0.24 0.0 -0.8 -0.36 -0.3 -0.37 -0.46 0.28 0.08 -0.17 -1.02 0.07 0.23 0.38 0.44 -0.29
Cpa|evm.model.tig00001284.2 (tig00001284_g8000.t1)
-3.79 -0.95 0.25 0.41 0.43 0.76 0.16 0.03 0.54 0.2 -0.08 -0.29 -3.0 -0.43 -0.58 -0.57 -0.25 0.26 0.34 0.19 -1.17 0.22 -0.12 0.67 0.53 0.17
Cpa|evm.model.tig00020531.50 (tig00020531_g10056.t1)
-0.31 -0.08 0.08 0.02 0.11 0.09 0.2 0.08 0.03 -0.03 -0.2 -0.37 -0.36 -0.12 0.23 0.21 0.23 0.52 0.49 0.32 -0.9 -0.11 0.28 -0.57 -0.33 -0.4
Cpa|evm.model.tig00020554.134 (tig00020554_g10911.t1)
-1.88 -0.97 -0.07 0.27 0.45 0.56 0.44 -0.04 -0.4 -0.2 -0.31 -0.08 -1.43 -1.09 -0.45 -0.63 0.13 0.18 0.11 -0.31 0.03 0.27 1.2 0.48 0.26 0.08
Cpa|evm.model.tig00020554.90 (tig00020554_g10868.t1)
-2.52 -0.13 -1.09 -0.18 0.51 0.78 0.21 0.2 -0.79 -0.72 -0.72 -0.3 -2.9 -1.29 -0.79 -0.84 -0.41 0.65 0.17 0.57 -0.69 -0.91 1.06 0.94 0.89 0.94
Cpa|evm.model.tig00020603.31 (tig00020603_g11763.t1)
-0.88 -0.56 -0.45 -0.56 -0.05 0.53 0.41 0.0 -0.36 -0.74 -0.9 -0.98 -0.68 0.16 0.32 0.22 0.12 0.81 0.48 0.21 -0.2 0.24 1.1 0.17 -0.8 -0.38
Cpa|evm.model.tig00020603.32 (tig00020603_g11763.t1)
-0.57 -0.64 -0.48 -0.52 0.28 0.86 0.33 -0.09 -0.42 -0.8 -0.78 -1.04 -0.93 0.12 0.46 0.34 0.32 0.66 0.57 0.09 -0.28 0.03 1.03 -0.25 -0.64 -0.59
Cpa|evm.model.tig00020610.69 (tig00020610_g12013.t1)
-1.15 -1.0 -1.11 -0.04 -0.57 0.89 0.62 -0.13 0.36 -0.71 -0.96 -1.58 -2.59 0.02 -0.39 0.06 -0.05 -0.37 0.74 0.43 0.84 0.12 1.56 -0.15 -0.16 -0.92
Cpa|evm.model.tig00020704.62 (tig00020704_g13217.t2)
-0.47 -0.31 0.21 0.19 0.49 0.56 0.4 0.35 0.43 -0.35 -0.06 -0.37 -0.84 -0.67 -0.12 0.1 -0.35 0.18 0.1 -0.05 -2.34 -0.64 0.58 0.11 0.09 0.28
Cpa|evm.model.tig00020746.9 (tig00020746_g13663.t1)
-2.56 -1.32 -0.65 -0.42 0.19 0.26 0.05 0.16 0.29 0.41 -0.03 -0.03 -2.71 -0.11 -0.38 -1.14 -0.13 0.65 0.51 0.08 0.32 0.34 0.45 0.28 0.33 0.51
Cpa|evm.model.tig00020816.31 (tig00020816_g14118.t1)
-2.0 -0.65 -0.23 0.0 0.37 0.65 0.4 0.42 0.59 0.09 -0.1 -0.12 -2.76 -0.18 0.14 0.67 -0.1 0.31 0.23 0.05 -3.21 0.02 -0.1 0.17 0.05 -0.01
Cpa|evm.model.tig00020830.119 (tig00020830_g14505.t1)
-2.01 -0.71 -0.19 0.2 0.52 0.72 0.81 0.42 0.35 -0.39 -0.62 -1.12 -3.03 0.28 -0.36 0.35 -0.25 -0.11 -0.1 -0.69 -0.66 0.95 0.76 -0.87 0.32 0.05
Cpa|evm.model.tig00020903.11 (tig00020903_g15079.t1)
-2.0 -1.18 -0.89 -0.18 0.46 0.59 0.57 0.25 -0.12 -0.38 -0.74 -1.21 -2.38 -0.05 0.15 0.6 0.11 0.48 0.72 -0.01 -0.85 0.34 0.96 -0.1 0.17 -0.14
Cpa|evm.model.tig00020904.76 (tig00020904_g15209.t1)
-2.96 -2.04 -0.64 -0.41 0.38 0.74 0.1 -0.38 -0.19 -0.45 -0.79 -0.62 -2.92 -0.26 -0.11 -0.26 0.16 0.14 0.77 0.26 -0.33 0.05 0.74 1.1 0.55 0.71
Cpa|evm.model.tig00020927.62 (tig00020927_g15993.t1)
-3.41 -2.84 -1.84 -1.52 -0.27 0.42 0.22 -0.01 0.51 0.71 0.34 0.12 -2.99 -0.46 -0.74 -0.31 0.32 0.3 0.16 0.63 0.59 0.18 0.83 1.07 -0.41 -0.47
Cpa|evm.model.tig00020961.59 (tig00020961_g16681.t1)
-0.0 -0.08 -0.02 0.12 0.28 0.4 0.38 0.29 0.26 0.02 -0.18 -0.34 -0.23 -0.36 -0.27 -0.16 -0.14 0.1 -0.08 0.01 -0.99 0.1 0.53 -0.21 -0.05 -0.15
Cpa|evm.model.tig00020961.65 (tig00020961_g16687.t1)
-3.41 -1.01 -0.96 -0.51 0.39 0.99 0.7 0.52 -0.46 -0.97 -1.99 -2.17 -4.27 -0.92 -0.21 1.14 0.13 0.55 0.32 0.23 -0.64 0.51 1.53 -0.02 -0.02 -0.85
Cpa|evm.model.tig00021108.18 (tig00021108_g18309.t1)
-0.94 -0.28 -0.04 0.1 0.5 0.8 0.48 0.35 0.33 0.05 0.02 -0.15 -0.69 0.04 -0.16 0.18 -0.35 0.17 -0.03 -0.35 -0.85 0.02 0.59 -0.52 -0.41 -0.56
Cpa|evm.model.tig00021179.26 (tig00021179_g19241.t1)
-0.55 -0.3 -0.26 -0.39 -0.42 -0.35 -0.62 -0.66 -0.15 -0.15 0.2 0.27 -0.62 -0.79 -0.64 0.09 -0.22 0.12 -0.25 -0.27 0.35 0.83 0.52 1.47 0.37 -0.26
Cpa|evm.model.tig00021179.72 (tig00021179_g19286.t1)
-0.21 -0.19 -0.12 0.18 0.35 0.38 0.38 0.17 0.23 -0.25 -0.34 -0.38 -0.45 -0.48 -0.38 -0.17 -0.26 0.14 -0.12 0.0 -0.35 0.21 0.27 0.01 0.69 -0.16
Cpa|evm.model.tig00021318.44 (tig00021318_g20160.t1)
-1.02 -0.82 -0.89 0.12 0.54 0.39 0.45 0.49 -0.02 -0.15 -0.15 -0.77 -2.24 -2.01 -1.74 -2.0 -0.96 0.48 0.38 -0.37 0.88 -1.11 1.8 0.74 0.31 -0.49
Cpa|evm.model.tig00021493.67 (tig00021493_g21905.t1)
-3.01 -1.92 -0.96 -0.91 -0.85 -0.45 -0.0 0.21 0.45 0.6 0.62 0.21 -2.62 -0.29 -0.92 -0.51 -0.36 0.43 0.33 0.22 0.58 0.06 0.83 0.53 0.61 0.57

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.