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  5. Transcript_contig_68421

Transcript_contig_68421 (68421)


Aliases : 68421

Description : Malate synthase [Interproscan].


Gene families : OG_01_0004035 (OrthoFinder) Phylogenetic Tree(s): OG0004035_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_68421
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Cre03.g144807 30786652, MAS1 Lipid metabolism.lipid degradation.fatty acid... 0.02 OrthoFinder
Cz14g25060.t1 No alias Malate synthase [Interproscan]. 0.02 OrthoFinder
Vocar.0014s0003.1 32888535 Malate synthase [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01002118.1_cds_GFH22763.1_17240 HaLaN_20275, GFH22763 Malate synthase 0.02 OrthoFinder
lcl|BLLF01002535.1_cds_GFH24432.1_18909 HaLaN_22228, GFH24432 Malate synthase 0.01 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60196.1_4404 PRW60196 Malate synthase 0.02 OrthoFinder
lcl|LHPG02000002.1_cds_PRW60559.1_4125 PRW60559 Malate synthase A isoform A 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEA Interproscan
BP GO:0006097 glyoxylate cycle IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
BP GO:0005996 monosaccharide metabolic process IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0006778 porphyrin-containing compound metabolic process IEP Enrichment
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Enrichment
BP GO:0006783 heme biosynthetic process IEP Enrichment
BP GO:0006784 heme A biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0016051 carbohydrate biosynthetic process IEP Enrichment
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Enrichment
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP Enrichment
MF GO:0016829 lyase activity IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016831 carboxy-lyase activity IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0033013 tetrapyrrole metabolic process IEP Enrichment
BP GO:0033014 tetrapyrrole biosynthetic process IEP Enrichment
BP GO:0042168 heme metabolic process IEP Enrichment
BP GO:0042440 pigment metabolic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046148 pigment biosynthetic process IEP Enrichment
BP GO:0046160 heme a metabolic process IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001465 Malate_synthase 1 274
No external refs found!