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  5. Cpa|evm.model.tig00000823.31

Cpa|evm.model.tig00000823.31 (tig00000823_g4557.t1)


Aliases : tig00000823_g4557.t1

Description : RNA processing.RNA splicing.U12-type-intron-specific minor spliceosome.U11/U12 small nuclear ribonucleoprotein particle (snRNP).U11/U12-31K snRNP component


Gene families : OG_01_0000048 (OrthoFinder) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000823.31
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Cre06.g288750 30780037, CBP20 No description available 0.02 OrthoFinder
Dusal.0108s00022.1 33189529 RNA recognition motif domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint signaling IEP Enrichment
BP GO:0000077 DNA damage checkpoint signaling IEP Enrichment
CC GO:0000814 ESCRT II complex IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
CC GO:0005788 endoplasmic reticulum lumen IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010948 negative regulation of cell cycle process IEP Enrichment
BP GO:0031570 DNA integrity checkpoint signaling IEP Enrichment
CC GO:0031974 membrane-enclosed lumen IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0042770 signal transduction in response to DNA damage IEP Enrichment
CC GO:0043233 organelle lumen IEP Enrichment
BP GO:0045786 negative regulation of cell cycle IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
CC GO:0070013 intracellular organelle lumen IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901988 negative regulation of cell cycle phase transition IEP Enrichment
InterPro domains Description Start Stop
IPR000504 RRM_dom 15 85
No external refs found!