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Heatmap: Cluster_120 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-4.74 -4.3 -0.62 0.44 0.08 0.67 -0.06 0.22 0.29 0.26 0.6 -0.63 -4.0 0.74 -1.79 -0.21 -2.71 -0.72 0.06 -0.39 -2.52 -0.49 1.65 0.6 0.71 0.94
Cpa|evm.model.tig00000076.75 (tig00000076_g2376.t1)
 -1.15 -0.84 -0.8 -0.53 -0.26 -0.37 0.28 0.08 0.21 0.53 0.25 0.0 -1.24 0.33 -0.01 -0.06 0.24 0.42 0.24 0.3 -2.19 -1.74 0.93 0.31 0.34 0.65
Cpa|evm.model.tig00000144.12 (tig00000144_g9001.t1)
 -0.63 -0.12 -0.29 0.06 0.04 -0.09 0.16 -0.25 0.23 0.17 -0.07 -0.19 -1.07 -0.2 -0.13 -0.07 -0.2 0.77 0.48 -0.05 -1.44 -0.25 0.45 0.59 -0.06 0.42
Cpa|evm.model.tig00000145.51 (tig00000145_g8852.t1)
 -2.6 -1.99 -1.91 -1.3 -1.1 -0.13 0.25 0.13 0.99 0.83 0.73 0.2 -2.43 0.33 -0.48 -0.89 0.04 0.56 0.36 0.38 -3.88 -2.14 1.3 0.56 0.12 0.65
Cpa|evm.model.tig00000215.36 (tig00000215_g18574.t1)
 -0.74 -0.03 0.16 0.22 0.38 -0.0 0.0 -0.23 -0.02 0.24 0.22 -0.04 -1.08 0.23 -0.15 0.03 -0.18 0.68 0.27 0.05 -3.65 -0.21 -0.4 0.34 0.26 0.31
Cpa|evm.model.tig00000215.37 (tig00000215_g18574.t1)
 -0.61 -0.27 0.08 0.29 -0.07 -0.51 -0.25 -0.29 -0.16 0.02 -0.18 -0.4 -1.56 0.29 -0.06 0.07 0.19 0.82 0.32 0.17 -3.16 -0.03 -0.28 0.56 0.55 0.73
Cpa|evm.model.tig00000248.36 (tig00000248_g21802.t1)
 -1.82 -0.63 -0.35 -0.14 0.21 0.17 0.21 -0.04 0.26 0.04 0.19 0.2 -1.45 0.07 0.07 -0.04 -0.15 0.06 0.12 -0.41 -0.77 0.06 0.72 0.51 0.41 0.26
Cpa|evm.model.tig00000248.68 (tig00000248_g21827.t1)
 -1.59 -0.58 -0.48 -0.52 -0.15 0.21 0.17 -0.1 0.42 0.24 -0.06 -0.16 -1.31 -0.08 0.54 -0.06 -0.33 0.48 0.43 0.02 -2.7 0.32 0.41 0.74 0.26 0.26
Cpa|evm.model.tig00000430.40 (tig00000430_g627.t1)
 -1.12 -0.59 -0.22 -0.51 -0.3 -0.49 -0.34 -0.38 0.61 0.78 0.43 0.41 -0.92 -1.01 -0.73 -0.64 0.16 0.62 0.18 0.79 -2.5 -0.35 0.84 0.31 0.44 0.24
Cpa|evm.model.tig00000444.10 (tig00000444_g800.t1)
 -1.93 -0.85 -0.77 -0.41 -0.13 0.34 -0.05 -0.08 0.25 0.59 0.47 0.24 -1.84 -0.09 -0.27 -0.22 -0.24 0.24 0.24 0.39 -1.73 -0.2 0.63 0.41 0.21 0.9
Cpa|evm.model.tig00000498.39 (tig00000498_g1615.t1)
 -1.91 -1.53 -0.23 -0.14 0.26 0.31 0.48 0.24 0.35 0.37 0.13 -0.13 -1.49 -0.11 -0.75 -0.2 -0.32 0.17 -0.07 -0.22 -0.79 -0.2 0.91 0.3 0.94 0.1
Cpa|evm.model.tig00000605.33 (tig00000605_g2499.t1)
 -1.54 -1.22 -1.21 -0.96 0.17 0.76 0.7 0.31 0.95 0.22 -0.1 -0.66 -3.35 -0.46 0.42 -0.09 0.17 0.28 0.35 0.05 -1.94 -0.36 0.84 0.47 -0.15 0.1
Cpa|evm.model.tig00000630.40 (tig00000630_g2726.t1)
 -2.85 -0.68 0.06 0.2 0.3 -0.11 0.06 -0.29 0.21 0.35 0.17 -0.27 -2.86 0.11 -0.35 0.38 -0.05 0.66 0.27 -0.1 -2.45 0.06 0.15 0.66 0.65 0.23
Cpa|evm.model.tig00000655.63 (tig00000655_g2891.t1)
 -1.39 -1.19 -1.04 -0.21 0.12 0.09 0.32 0.14 0.74 0.7 0.76 0.35 -1.89 -1.25 -0.31 -1.54 -0.3 0.75 0.13 0.3 -0.54 -0.58 0.49 0.45 0.09 0.29
Cpa|evm.model.tig00000718.4 (tig00000718_g3680.t1)
 -1.3 -1.08 -0.69 -0.53 -0.13 0.01 0.35 0.0 0.34 0.71 0.43 0.25 -1.11 -0.35 -0.14 -0.02 0.04 0.46 0.12 0.34 -1.19 -0.12 0.32 0.59 0.29 -0.09
Cpa|evm.model.tig00000733.6 (tig00000733_g3772.t1)
 -1.71 -3.09 -1.48 -0.53 -0.13 0.07 0.26 -0.14 0.24 0.47 0.2 -0.19 -1.38 -0.38 0.54 -0.67 -0.19 0.0 0.29 0.21 -1.73 0.87 1.04 0.35 0.63 0.46
Cpa|evm.model.tig00000733.7 (tig00000733_g3772.t1)
 -1.71 -2.96 -1.66 -0.56 0.11 -0.29 0.45 0.08 0.16 0.56 0.4 -0.03 -1.13 -0.62 0.4 -0.75 -0.14 0.12 0.15 0.24 -1.82 0.97 0.81 0.57 0.46 0.27
Cpa|evm.model.tig00000823.31 (tig00000823_g4557.t1)
 -2.9 -0.95 -0.87 -0.6 -0.43 0.06 0.13 -0.03 0.09 0.33 0.07 0.29 -3.11 -0.14 0.32 0.02 0.17 0.65 0.86 0.14 -2.38 -0.34 0.89 0.8 -0.04 0.32
Cpa|evm.model.tig00000850.13 (tig00000850_g4802.t1)
 -1.33 -0.8 -0.39 -0.34 -0.01 0.01 -0.03 -0.12 0.24 0.45 0.13 0.05 -1.47 -0.03 0.17 -0.12 -0.24 0.44 0.25 -0.16 -3.15 0.08 0.54 0.79 0.47 0.57
Cpa|evm.model.tig00000851.22 (tig00000851_g4908.t1)
 -4.01 -4.69 -1.68 -0.26 -0.05 0.29 0.21 -0.51 0.64 0.14 -0.11 -0.1 -2.01 -0.25 0.62 -0.11 0.23 0.74 0.08 -0.09 -1.83 0.77 0.86 0.42 0.42 0.39
Cpa|evm.model.tig00000852.35 (tig00000852_g5047.t1)
 -1.1 -0.22 -0.05 0.14 -0.16 -0.43 0.3 0.28 0.19 0.21 0.19 -0.14 -1.2 -0.25 0.05 -0.12 -0.32 0.83 0.16 0.33 -4.72 -0.74 0.03 0.47 0.68 0.44
Cpa|evm.model.tig00000863.50 (tig00000863_g5004.t1)
 -4.52 -2.68 -2.57 -1.17 -0.15 0.47 0.87 -0.3 0.59 0.19 0.02 -0.95 -3.68 0.03 0.64 -0.2 -0.03 0.51 0.38 -0.42 -1.95 -0.58 1.33 1.21 0.76 -0.62
Cpa|evm.model.tig00001024.8 (tig00001024_g6318.t1)
 -1.53 -0.78 -1.01 -0.38 -0.11 -0.05 0.23 0.11 0.63 0.4 0.02 -0.33 -1.38 0.33 -0.1 0.39 -0.35 -0.04 0.1 -0.35 -2.24 0.43 0.5 0.42 0.86 0.46
Cpa|evm.model.tig00001038.22 (tig00001038_g6531.t1)
 -3.14 -0.18 -0.51 0.18 0.58 0.18 0.52 0.5 0.3 -0.0 0.14 -0.27 -3.37 -0.8 -0.09 -0.32 -0.14 1.06 0.79 0.13 -4.73 -0.75 -0.33 0.65 0.28 0.13
Cpa|evm.model.tig00001057.26 (tig00001057_g6700.t1)
 -0.78 0.1 -0.02 -0.23 -0.24 -0.52 0.19 -0.14 0.12 -0.09 -0.11 0.04 -0.83 0.15 -0.1 0.13 -0.16 0.86 0.51 -0.13 -2.39 -0.47 0.24 0.55 0.56 0.19
Cpa|evm.model.tig00001221.5 (tig00001221_g7591.t1)
 -0.81 -0.94 -1.28 -0.96 -0.75 -0.03 0.14 0.03 0.49 0.51 0.27 0.04 -1.13 -0.34 0.13 -0.39 0.08 0.54 0.61 0.35 -1.5 -1.99 1.33 0.51 0.22 0.12
Cpa|evm.model.tig00001264.15 (tig00001264_g7871.t1)
 -4.26 -2.56 -1.42 -0.8 0.03 0.56 0.36 -0.05 0.84 0.55 0.21 -0.12 -4.51 -0.36 1.06 -0.34 0.07 0.54 0.04 0.27 -1.52 -1.4 0.95 0.57 -0.13 0.35
Cpa|evm.model.tig00001428.13 (tig00001428_g8733.t1)
 -2.25 -1.41 -1.04 -0.94 -0.33 -0.08 0.18 -0.04 0.27 0.27 0.19 0.12 -2.16 -0.53 -0.83 -0.66 0.01 0.52 0.36 -0.04 -0.58 -0.36 1.27 1.19 0.71 0.43
Cpa|evm.model.tig00001471.9 (tig00001471_g8871.t1)
 -1.83 -1.12 -0.93 -0.75 -0.49 -0.22 0.04 0.1 0.65 0.51 0.6 -0.07 -2.47 -0.37 0.19 -0.24 -0.19 0.31 -0.19 -0.22 -1.79 0.5 1.2 1.04 0.13 0.09
Cpa|evm.model.tig00001490.1 (tig00001490_g8964.t1)
 -3.76 -2.79 -1.39 -1.48 -1.28 -1.22 -0.1 -0.49 0.43 0.73 0.71 0.55 -2.8 0.37 0.3 -0.05 -0.43 -0.27 -0.71 -0.11 -1.34 -0.36 1.99 -1.04 1.32 0.65
Cpa|evm.model.tig00001532.13 (tig00001532_g9279.t1)
 -1.29 -0.62 -0.2 0.08 0.15 0.24 0.32 0.18 0.32 0.18 0.11 0.18 -1.07 -0.03 -0.05 -0.23 -0.47 0.06 -0.34 -0.31 -0.97 -0.08 0.81 0.06 0.56 0.47
Cpa|evm.model.tig00020553.51 (tig00020553_g10539.t1)
 -3.48 -2.69 -2.9 -1.5 -0.28 0.06 0.38 0.26 0.53 0.38 0.19 -0.51 -3.57 -0.68 -0.58 -1.09 -0.04 0.64 0.42 0.06 -2.69 0.39 1.49 1.09 0.83 0.46
Cpa|evm.model.tig00020563.183 (tig00020563_g11384.t1)
 -0.7 -1.07 -0.94 -0.47 0.01 0.28 0.51 0.42 0.6 0.41 0.35 0.14 -0.91 -0.55 -0.93 -0.99 -0.52 0.3 -0.12 -0.28 -1.43 -0.45 1.05 1.03 0.27 0.19
Cpa|evm.model.tig00020563.24 (tig00020563_g11207.t1)
 -4.95 -0.91 -0.32 0.28 0.3 0.35 0.31 0.12 0.24 0.03 0.09 -0.46 -3.95 -0.63 0.07 -0.34 -0.08 1.23 0.55 0.26 -2.5 0.11 -0.17 0.2 0.99 -0.31
Cpa|evm.model.tig00020614.121 (tig00020614_g12237.t1)
 -2.09 -1.78 -1.36 -0.46 0.09 -0.07 0.4 0.4 0.48 0.24 0.36 -0.07 -2.53 -0.87 -0.65 -0.56 0.01 0.63 0.42 -0.21 -1.83 -0.25 1.39 0.74 0.63 0.17
Cpa|evm.model.tig00020614.44 (tig00020614_g12157.t1)
 -2.3 -1.38 -0.61 -0.23 0.19 0.34 -0.03 -0.32 0.54 0.16 -0.15 -0.49 -2.55 -0.14 0.55 0.01 0.15 0.22 -0.2 -0.28 -2.27 -0.04 1.07 0.62 0.49 0.83
Cpa|evm.model.tig00020629.94 (tig00020629_g12415.t1)
 -2.14 -2.36 -1.17 -1.19 -0.73 -0.6 -0.11 -0.07 1.32 1.15 1.17 0.69 -2.47 -0.87 -1.27 -1.27 -0.28 1.04 -0.23 0.08 -0.35 -1.44 0.75 0.86 -0.3 0.19
Cpa|evm.model.tig00020848.16 (tig00020848_g14543.t1)
 -4.8 -2.83 -1.25 -0.61 0.01 0.44 0.25 0.0 0.52 0.62 0.37 0.16 -5.24 -0.3 0.03 -0.45 0.12 0.62 0.43 0.15 -1.76 -1.15 1.07 0.55 0.46 0.52
Cpa|evm.model.tig00020912.77 (tig00020912_g15847.t1)
 -3.11 -2.55 -1.05 -1.1 -0.81 -0.84 0.18 0.13 0.65 0.77 0.76 0.27 -2.74 -0.96 -0.03 -0.99 -0.28 0.7 0.12 -0.07 -3.17 -0.19 1.24 1.24 0.53 0.53
Cpa|evm.model.tig00020927.8 (tig00020927_g15937.t1)
 -0.56 -1.22 -1.66 -1.3 -0.28 0.16 0.5 0.05 0.23 0.39 -0.04 -0.2 -0.91 -0.41 -0.07 -0.51 0.33 0.62 0.62 0.36 -1.83 -1.57 0.98 1.2 -0.04 0.07
Cpa|evm.model.tig00020960.73 (tig00020960_g16602.t1)
 -1.57 -0.78 -0.05 -0.02 -0.26 -0.1 0.16 0.19 0.5 0.62 0.33 0.03 -1.69 0.6 -0.69 0.21 -0.06 0.16 -0.12 0.22 -1.95 -1.16 0.56 -0.16 0.55 0.64
Cpa|evm.model.tig00021070.81 (tig00021070_g17890.t1)
 -3.18 -5.09 -2.23 -0.56 0.13 0.2 0.49 0.05 0.77 0.37 0.08 -0.32 -2.54 -0.07 0.6 -0.11 0.12 0.38 0.04 -0.14 -2.65 0.75 0.66 0.29 0.7 0.34
Cpa|evm.model.tig00021127.159 (tig00021127_g18843.t1)
 -1.58 -1.36 -1.08 -0.63 -0.16 -0.03 0.39 0.38 0.28 0.69 0.65 0.25 -2.07 -0.54 -0.96 -0.21 -0.02 0.28 0.24 0.73 -4.18 -0.49 0.86 0.61 0.23 0.55
Cpa|evm.model.tig00021127.35 (tig00021127_g18712.t1)
 -4.21 -3.01 -1.35 -1.08 -0.15 0.42 0.24 -0.1 0.45 0.19 -0.34 -0.66 -4.19 -0.2 0.31 -0.4 0.22 0.21 0.93 0.22 -2.24 -1.61 1.88 0.68 0.31 0.38
Cpa|evm.model.tig00021167.3 (tig00021167_g19058.t1)
 -4.6 -1.61 -1.09 -0.23 0.25 -0.02 0.4 0.24 0.57 0.63 0.41 0.05 -4.78 -0.59 -1.03 -1.0 -0.32 0.63 0.35 -0.02 -1.49 -0.78 0.95 1.02 0.65 0.55
-1.92 -1.62 -0.68 0.13 -0.36 -0.3 0.95 0.82 0.47 0.12 -0.9 -0.88 -2.52 -0.81 -0.41 0.34 -0.11 1.19 0.45 0.27 -1.64 -0.09 -0.11 0.41 0.71 0.21
Cpa|evm.model.tig00021428.15 (tig00021428_g21157.t1)
 -2.87 -3.18 -1.5 -0.61 -0.53 -0.09 0.18 0.21 0.76 0.71 0.41 0.49 -1.91 -0.11 0.9 -0.39 0.22 0.4 0.21 0.39 -0.77 -0.48 0.36 0.53 -0.23 0.15
Cpa|evm.model.tig00021537.66 (tig00021537_g22318.t1)
 -2.3 -1.37 -1.22 -1.46 -1.03 -0.04 0.32 0.5 0.42 0.69 0.62 0.35 -1.6 -0.23 -0.54 0.1 0.62 0.62 0.46 0.59 -1.8 -2.03 0.47 1.02 -0.27 0.05
Cpa|evm.model.tig00021680.26 (tig00021680_g23047.t1)
 -5.36 -4.68 -1.71 -0.92 -0.57 -0.08 0.42 0.03 1.03 0.86 0.35 -0.12 -4.72 -0.33 -0.32 -0.95 0.37 0.97 0.25 0.89 -2.48 -0.54 0.89 0.28 -0.05 0.79
Cpa|evm.model.tig00021680.4 (tig00021680_g23024.t2)
 -3.02 -3.41 -1.49 -1.12 -0.26 0.42 0.53 0.22 0.88 0.66 0.4 0.16 -2.59 0.08 -0.74 -0.3 -0.28 -0.09 -0.05 0.15 -2.93 0.07 0.99 0.36 0.93 0.57
Cpa|evm.model.tig00021795.18 (tig00021795_g23536.t2)
 -3.15 -1.12 -0.46 0.13 0.27 0.2 0.27 0.0 0.64 0.56 0.37 0.31 -2.64 0.35 -0.15 -0.44 -0.37 -0.14 -0.45 -0.33 -1.61 -0.72 1.44 -0.14 0.43 0.37

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.