Aliases : 67487
Description : Helicase, C-terminal; SNF2-related, N-terminal domain [Interproscan].
Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Transcript_contig_67487 | |
Cluster | HCCA: Cluster_189 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cpa|evm.model.tig00000983.26 | tig00000983_g5915.t1 | RNA biosynthesis.RNA polymerase II-dependent... | 0.01 | OrthoFinder | |
Cpa|evm.model.tig00020960.24 | tig00020960_g16545.t1 | Protein CHROMATIN REMODELING 5 OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cpa|evm.model.tig00021275.25 | tig00021275_g19885.t1 | Probable chromatin-remodeling complex ATPase chain... | 0.01 | OrthoFinder | |
Cre02.g087600 | 30785983 | Protein CHROMATIN REMODELING 19 OS=Arabidopsis thaliana | 0.03 | OrthoFinder | |
Cre03.g162701 | 30788203 | Chromatin structure-remodeling complex protein SYD... | 0.02 | OrthoFinder | |
Cre07.g325700 | 30774388 | ATP-dependent helicase BRM OS=Arabidopsis thaliana | 0.02 | OrthoFinder | |
Cre08.g377200 | 30773522 | CHD3-type chromatin-remodeling factor PICKLE... | 0.02 | OrthoFinder | |
Cz02g31160.t1 | No alias | Helicase, C-terminal; SLIDE domain; SNF2-related,... | 0.03 | OrthoFinder | |
Cz05g24240.t1 | No alias | SNF2-related, N-terminal domain; Helicase, C-terminal... | 0.02 | OrthoFinder | |
Cz19g07040.t1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.02 | OrthoFinder | |
Dusal.0047s00031.1 | 33194295 | Helicase, C-terminal; SLIDE domain; ISWI, HAND domain;... | 0.01 | OrthoFinder | |
Dusal.0752s00003.1 | 33199467 | HEAT-like repeat [Interproscan]. | 0.02 | OrthoFinder | |
EOD05386 | No alias | Chromo domain; Helicase, C-terminal; SNF2-related,... | 0.01 | OrthoFinder | |
EOD18155 | No alias | High mobility group box domain; ISWI, HAND domain;... | 0.01 | OrthoFinder | |
EOD21430 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
EOD23118 | No alias | SNF2-related, N-terminal domain [Interproscan]. | 0.01 | OrthoFinder | |
EOD26256 | No alias | ISWI, HAND domain; Helicase, C-terminal; SNF2-related,... | 0.01 | OrthoFinder | |
EOD27679 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
EOD29581 | No alias | ISWI, HAND domain [Interproscan]. | 0.01 | OrthoFinder | |
EOD36957 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.02 | OrthoFinder | |
EOD41895 | No alias | Helicase, C-terminal [Interproscan]. | 0.01 | OrthoFinder | |
EOD41956 | No alias | Chromo domain; Helicase, C-terminal; SNF2-related,... | 0.02 | OrthoFinder | |
OT_01G05670.1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.01 | OrthoFinder | |
OT_06G03660.1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain;... | 0.01 | OrthoFinder | |
PTI_03G03660.1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.01 | OrthoFinder | |
PTI_04G04910.1 | No alias | Helicase, C-terminal; SNF2-related, N-terminal domain... | 0.01 | OrthoFinder | |
Sro125_g060200.1 | Contig2833.g22731 | Chromodomain-helicase-DNA-binding protein | 0.01 | OrthoFinder | |
Sro463_g148220.1 | Contig3968.g30431 | Probable chromatin-remodeling complex ATPase chain | 0.01 | OrthoFinder | |
Sro847_g210300.1 | Contig4605.g34375 | CHD3-type chromatin-remodeling factor | 0.01 | OrthoFinder | |
Vocar.0015s0331.1 | 32898932 | Chromo domain; Helicase, C-terminal; SNF2-related,... | 0.01 | OrthoFinder | |
XM_002503125.1 | MICPUN_91017, 91017 | SNF2 super family | 0.02 | OrthoFinder | |
lcl|BLLF01000001.1_cds_GFH05549.1_26 | HaLaN_00029, GFH05549 | Helicase, C-terminal; SLIDE domain; ISWI, HAND domain... | 0.01 | OrthoFinder | |
lcl|BLLF01000160.1_cds_GFH08429.1_2906 | HaLaN_03388, GFH08429 | Chromo domain; Helicase, C-terminal; SNF2-related,... | 0.02 | OrthoFinder | |
lcl|BLLF01000629.1_cds_GFH13581.1_8058 | HaLaN_09499, GFH13581 | SNF2-related, N-terminal domain [Interproscan]. | 0.01 | OrthoFinder | |
lcl|BLLF01003474.1_cds_GFH27437.1_21914 | HaLaN_25757, GFH27437 | SNF2-related, N-terminal domain [Interproscan]. | 0.01 | OrthoFinder | |
lcl|LHPG02000008.1_cds_PRW56740.1_9705 | PRW56740 | Chromatin-remodeling complex ATPase chain | 0.02 | OrthoFinder | |
lcl|LHPG02000013.1_cds_PRW44381.1_2263 | PRW44381 | Chromodomain-helicase-DNA-binding | 0.02 | OrthoFinder | |
lcl|VRMN01000004.1_cds_KAA8494382.1_2912 | KAA8494382 | ISWI chromatin-remodeling complex ATPase CHR17 | 0.01 | OrthoFinder | |
lcl|VRMN01000007.1_cds_KAA8493126.1_9427 | KAA8493126 | Chromatin structure-remodeling complex subunit snf21 | 0.02 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000155 | phosphorelay sensor kinase activity | IEP | Enrichment |
BP | GO:0000160 | phosphorelay signal transduction system | IEP | Enrichment |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Enrichment |
MF | GO:0003824 | catalytic activity | IEP | Enrichment |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
MF | GO:0004057 | arginyltransferase activity | IEP | Enrichment |
MF | GO:0004673 | protein histidine kinase activity | IEP | Enrichment |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | Enrichment |
MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
MF | GO:0005216 | ion channel activity | IEP | Enrichment |
MF | GO:0005515 | protein binding | IEP | Enrichment |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
BP | GO:0006464 | cellular protein modification process | IEP | Enrichment |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0007165 | signal transduction | IEP | Enrichment |
BP | GO:0008150 | biological_process | IEP | Enrichment |
BP | GO:0008152 | metabolic process | IEP | Enrichment |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Enrichment |
MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
BP | GO:0009987 | cellular process | IEP | Enrichment |
MF | GO:0015267 | channel activity | IEP | Enrichment |
BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Enrichment |
BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
BP | GO:0016567 | protein ubiquitination | IEP | Enrichment |
BP | GO:0016579 | protein deubiquitination | IEP | Enrichment |
BP | GO:0016598 | protein arginylation | IEP | Enrichment |
MF | GO:0016740 | transferase activity | IEP | Enrichment |
MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
MF | GO:0016775 | phosphotransferase activity, nitrogenous group as acceptor | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | Enrichment |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Enrichment |
BP | GO:0032446 | protein modification by small protein conjugation | IEP | Enrichment |
BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Enrichment |
BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Enrichment |
BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Enrichment |
BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Enrichment |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
BP | GO:0035556 | intracellular signal transduction | IEP | Enrichment |
BP | GO:0036211 | protein modification process | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0043412 | macromolecule modification | IEP | Enrichment |
BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044267 | cellular protein metabolic process | IEP | Enrichment |
BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
BP | GO:0065007 | biological regulation | IEP | Enrichment |
BP | GO:0070646 | protein modification by small protein removal | IEP | Enrichment |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | Enrichment |
BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
MF | GO:0140110 | transcription regulator activity | IEP | Enrichment |
MF | GO:0140299 | small molecule sensor activity | IEP | Enrichment |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Enrichment |
No external refs found! |