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  5. Transcript_contig_65994

Transcript_contig_65994 (65994)


Aliases : 65994

Description : Ribosomal protein S10 domain [Interproscan].


Gene families : OG_01_0003147 (OrthoFinder) Phylogenetic Tree(s): OG0003147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_65994
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
EOD09635 No alias Ribosomal protein S10 domain [Interproscan]. 0.02 OrthoFinder
Sro143_g066550.1 Contig3754.g28761 40S ribosomal protein S20 0.01 OrthoFinder
TP04G01100.1 No alias Ribosomal protein S10 domain [Interproscan]. 0.02 OrthoFinder
XM_003062597.1 MicpuC2_35904, 35904 Ribosomal protein S10 domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005198 structural molecule activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
BP GO:0006518 peptide metabolic process IEP Enrichment
BP GO:0034645 cellular macromolecule biosynthetic process IEP Enrichment
BP GO:0043043 peptide biosynthetic process IEP Enrichment
CC GO:0043228 non-membrane-bounded organelle IEP Enrichment
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Enrichment
BP GO:0043603 cellular amide metabolic process IEP Enrichment
BP GO:0043604 amide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 1 34
No external refs found!