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Transcript_contig_62005 (62005)


Aliases : 62005

Description : Root UVB sensitive family [Interproscan].


Gene families : OG_01_0000194 (OrthoFinder) Phylogenetic Tree(s): OG0000194_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_62005
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Cre09.g396050 30780666 Protein root UVB sensitive 4 OS=Arabidopsis thaliana 0.01 OrthoFinder
Transcript_contig_58355 58355 Root UVB sensitive family [Interproscan]. 0.01 OrthoFinder
Vocar.0011s0082.1 32895222 Root UVB sensitive family [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004190 aspartic-type endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005516 calmodulin binding IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
MF GO:0070001 aspartic-type peptidase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR006968 RUS_fam 103 273
No external refs found!