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Aliases : tig00000792_g4177.t1
Description : Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT6 regulatory component
Gene families : OG_01_0003335 (OrthoFinder) Phylogenetic Tree(s): OG0003335_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Cpa|evm.model.tig00000792.28 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre04.g216600 | 30791032, RPT6 | Protein degradation.26S proteasome.regulatory... | 0.16 | OrthoFinder | |
| Cz10g11260.t1 | No alias | AAA ATPase, AAA+ lid domain; Carbohydrate kinase PfkB;... | 0.01 | OrthoFinder | |
| Dusal.0699s00007.1 | 33197713 | ATPase, AAA-type, core; Proteasomal ATPase OB C-terminal... | 0.01 | OrthoFinder | |
| EOD30412 | No alias | Proteasomal ATPase OB C-terminal domain; AAA ATPase,... | 0.08 | OrthoFinder | |
| PTI_20G01720.1 | No alias | ATPase, AAA-type, core; AAA ATPase, AAA+ lid domain;... | 0.14 | OrthoFinder | |
| Sro143_g066740.1 | Contig3754.g28780 | Proteasome regulatory subunit 8 | 0.16 | OrthoFinder | |
| TP02G00960.1 | No alias | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.11 | OrthoFinder | |
| Transcript_contig_89334 | 89334 | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.04 | OrthoFinder | |
| Vocar.0013s0283.1 | 32896350 | Proteasomal ATPase OB C-terminal domain; ATPase,... | 0.04 | OrthoFinder | |
| XM_002501302.1 | MICPUN_93957, 93957 | Proteasomal ATPase | 0.05 | OrthoFinder | |
| XM_003062383.1 | MicpuC2_35932, 35932 | Proteasomal ATPase | 0.04 | OrthoFinder | |
| lcl|LHPG02000011.1_cds_PRW45593.1_1261 | PRW45593 | 26S protease regulatory subunit 8-like protein A | 0.03 | OrthoFinder | |
| lcl|VRMN01000008.1_cds_KAA8492771.1_2507 | KAA8492771 | 26S protease regulatory subunit 8-like A | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Enrichment |
| CC | GO:0000502 | proteasome complex | IEP | Enrichment |
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0003924 | GTPase activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004357 | glutamate-cysteine ligase activity | IEP | Enrichment |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | Enrichment |
| MF | GO:0004618 | phosphoglycerate kinase activity | IEP | Enrichment |
| MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
| MF | GO:0005509 | calcium ion binding | IEP | Enrichment |
| CC | GO:0005575 | cellular_component | IEP | Enrichment |
| CC | GO:0005643 | nuclear pore | IEP | Enrichment |
| CC | GO:0005839 | proteasome core complex | IEP | Enrichment |
| BP | GO:0006090 | pyruvate metabolic process | IEP | Enrichment |
| BP | GO:0006091 | generation of precursor metabolites and energy | IEP | Enrichment |
| BP | GO:0006096 | glycolytic process | IEP | Enrichment |
| BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | Enrichment |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0006605 | protein targeting | IEP | Enrichment |
| BP | GO:0006612 | protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | Enrichment |
| BP | GO:0006757 | ATP generation from ADP | IEP | Enrichment |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
| MF | GO:0008312 | 7S RNA binding | IEP | Enrichment |
| BP | GO:0009056 | catabolic process | IEP | Enrichment |
| BP | GO:0009057 | macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | Enrichment |
| BP | GO:0010921 | regulation of phosphatase activity | IEP | Enrichment |
| MF | GO:0016301 | kinase activity | IEP | Enrichment |
| MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Enrichment |
| MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Enrichment |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Enrichment |
| MF | GO:0016881 | acid-amino acid ligase activity | IEP | Enrichment |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Enrichment |
| BP | GO:0019220 | regulation of phosphate metabolic process | IEP | Enrichment |
| CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Enrichment |
| MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
| MF | GO:0019899 | enzyme binding | IEP | Enrichment |
| MF | GO:0019902 | phosphatase binding | IEP | Enrichment |
| MF | GO:0019903 | protein phosphatase binding | IEP | Enrichment |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | Enrichment |
| BP | GO:0031399 | regulation of protein modification process | IEP | Enrichment |
| BP | GO:0032268 | regulation of cellular protein metabolic process | IEP | Enrichment |
| CC | GO:0032991 | protein-containing complex | IEP | Enrichment |
| BP | GO:0033365 | protein localization to organelle | IEP | Enrichment |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0035303 | regulation of dephosphorylation | IEP | Enrichment |
| BP | GO:0035304 | regulation of protein dephosphorylation | IEP | Enrichment |
| MF | GO:0036094 | small molecule binding | IEP | Enrichment |
| MF | GO:0043167 | ion binding | IEP | Enrichment |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0043666 | regulation of phosphoprotein phosphatase activity | IEP | Enrichment |
| BP | GO:0044248 | cellular catabolic process | IEP | Enrichment |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Enrichment |
| BP | GO:0045047 | protein targeting to ER | IEP | Enrichment |
| BP | GO:0046031 | ADP metabolic process | IEP | Enrichment |
| BP | GO:0046939 | nucleotide phosphorylation | IEP | Enrichment |
| CC | GO:0048500 | signal recognition particle | IEP | Enrichment |
| BP | GO:0050790 | regulation of catalytic activity | IEP | Enrichment |
| BP | GO:0051174 | regulation of phosphorus metabolic process | IEP | Enrichment |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | Enrichment |
| BP | GO:0051336 | regulation of hydrolase activity | IEP | Enrichment |
| BP | GO:0051603 | proteolysis involved in cellular protein catabolic process | IEP | Enrichment |
| BP | GO:0051668 | localization within membrane | IEP | Enrichment |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0065009 | regulation of molecular function | IEP | Enrichment |
| MF | GO:0070003 | threonine-type peptidase activity | IEP | Enrichment |
| BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | Enrichment |
| BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | Enrichment |
| BP | GO:0072657 | protein localization to membrane | IEP | Enrichment |
| BP | GO:0090150 | establishment of protein localization to membrane | IEP | Enrichment |
| MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Enrichment |
| BP | GO:1901575 | organic substance catabolic process | IEP | Enrichment |
| CC | GO:1905368 | peptidase complex | IEP | Enrichment |
| CC | GO:1905369 | endopeptidase complex | IEP | Enrichment |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Enrichment |
| No external refs found! |