Sequence Description Alias PCC hrr Cpa|evm.model.tig00001042.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT2 regulatory component tig00001042_g6583.t1 0.965604845519914 2 Cpa|evm.model.tig00000718.6 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT4 regulatory component tig00000718_g3683.t1 0.9605329026984101 3 Cpa|evm.model.tig00000912.18 tig00000912_g5423.t1 0.940565697287355 3 Cpa|evm.model.tig00020556.31 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein recruiting.ARF-GTPase tig00020556_g10999.t1 0.936334889765267 4 Cpa|evm.model.tig00021357.40 Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana tig00021357_g20766.t1 0.9355469209729881 5 Cpa|evm.model.tig00001542.22 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component tig00001542_g9329.t1 0.9315166176630332 7 Cpa|evm.model.tig00021168.13 AP-2 complex subunit mu OS=Arabidopsis thaliana tig00021168_g19079.t1 0.927663935935852 7 Cpa|evm.model.tig00000829.9 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN10 regulatory component tig00000829_g4652.t1 0.9266288977410263 9 Cpa|evm.model.tig00000615.75 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN7 regulatory component tig00000615_g2605.t1 0.9251090853826303 10 Cpa|evm.model.tig00001187.20 26S proteasome regulatory subunit 6A homolog OS=Oryza sativa subsp. japonica tig00001187_g7469.t1 0.923534028743378 10 Cpa|evm.model.tig00021348.57 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN5 regulatory component tig00021348_g20560.t1 0.9215407192912576 11 Cpa|evm.model.tig00021571.12 Protein modification.N-linked glycosylation.DPMS dolichol-phosphate-mannose synthase complex.DPMS1 catalytic component tig00021571_g22362.t1 0.9211567045566577 12 Cpa|evm.model.tig00020554.31 Enzyme classification.EC_5 isomerases.EC_5.1 racemase or epimerase(50.5.1 : 388.2) & GDP-mannose 3,5-epimerase OS=Arabidopsis thaliana tig00020554_g10816.t1 0.9204426420012772 13 Cpa|evm.model.tig00000808.43 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-7 component tig00000808_g4429.t1 0.9204240208209505 14 Cpa|evm.model.tig00022075.46 26S proteasome regulatory subunit 6B homolog OS=Arabidopsis thaliana tig00022075_g23607.t1 0.9198772305910728 15 Cpa|evm.model.tig00020965.21 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-3 component tig00020965_g16836.t1 0.9193290711089047 16 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component tig00020909_g15357.t1 0.9165434930065061 17 Cpa|evm.model.tig00020553.161 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-L-rhamnose synthesis.UDP-L-rhamnose synthase tig00020553_g10653.t1 0.9163541543485408 42 Cpa|evm.model.tig00020903.27 Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana tig00020903_g15093.t1 0.9154128097167098 19 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.9134373367759924 24 Cpa|evm.model.tig00001339.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-6 component tig00001339_g8261.t1 0.9132259763911657 21 Cpa|evm.model.tig00021319.35 tig00021319_g20229.t1 0.9124556961810079 22 Cpa|evm.model.tig00000989.12 Phytohormones.cytokinin.perception and signal transduction.AHP-type signal transducer tig00000989_g6085.t1 0.9122994275968476 23 Cpa|evm.model.tig00020848.37 Carbohydrate metabolism.nucleotide sugar biosynthesis.UDP-D-glucuronic acid synthesis.UDP-D-glucose 6-dehydrogenase tig00020848_g14564.t1 0.9087430728802118 24 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.9074197697928086 34 Cpa|evm.model.tig00000615.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN6 regulatory component tig00000615_g2608.t1 0.9072373510341145 28 Cpa|evm.model.tig00021464.30 Phytohormones.brassinosteroid.perception and signal transduction.receptor complex.receptor kinase regulator protein (MSBP) tig00021464_g21735.t1 0.9067652152623072 27 Cpa|evm.model.tig00000403.78 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN8 regulatory component tig00000403_g338.t1 0.9036115849423336 32 Cpa|evm.model.tig00001107.3 Secondary metabolism.terpenoids.mevalonate pathway.isopentenyl diphosphate isomerase tig00001107_g7091.t1 0.8996639172072932 29 Cpa|evm.model.tig00021435.47 Calmodulin OS=Mougeotia scalaris tig00021435_g21427.t1 0.8978270042015482 30 Cpa|evm.model.tig00020553.154 tig00020553_g10645.t1 0.8977227447366922 39 Cpa|evm.model.tig00022075.59 Cytoskeleton.microfilament network.actin polymerisation.Arp2/3 actin polymerization initiation complex.Arp2 component tig00022075_g23621.t1 0.8976613340660047 72 Cpa|evm.model.tig00020848.76 0.8955197687732763 33 Cpa|evm.model.tig00001428.10 tig00001428_g8729.t1 0.8954970055699611 34 Cpa|evm.model.tig00021464.16 Protein degradation.26S proteasome.regulatory particle.ATPase subunits.RPT1 regulatory component tig00021464_g21722.t1 0.894998935763765 35 Cpa|evm.model.tig00001160.15 Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-1 component tig00001160_g7349.t1 0.8933901337463993 36 Cpa|evm.model.tig00000704.54 Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana tig00000704_g3341.t1 0.8921851744260283 37 Cpa|evm.model.tig00021464.53 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.H-class RAB GTPase tig00021464_g21756.t1 0.8920827538091562 52 Cpa|evm.model.tig00021365.9 tig00021365_g20822.t1 0.8920807324878034 39 Cpa|evm.model.tig00020554.128 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.ARF-GTPase-activating (ARF-GAP) activities.class II ARF-GAP protein tig00020554_g10904.t1 0.8913796897751863 40 Cpa|evm.model.tig00021348.94 tig00021348_g20601.t1 0.891261832391212 57 Cpa|evm.model.tig00001107.5 tig00001107_g7093.t1 0.8910269511605846 72 Cpa|evm.model.tig00001098.5 Protein degradation.26S proteasome.20S core protease.beta-type subunits.beta type-1 component tig00001098_g7056.t1 0.8906321914005542 43 Cpa|evm.model.tig00000411.74 tig00000411_g580.t1 0.8901860040268794 44 Cpa|evm.model.tig00021181.5 Vesicle trafficking.clathrin coated vesicle (CCV) machinery.AP-1 trans-Golgi network cargo adaptor complex.AP1M medium mu subunit tig00021181_g19309.t1 0.8899013147292334 45 Cpa|evm.model.tig00001085.16 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB maturation.UCH1 ubiquitin carboxyl-terminal hydrolase tig00001085_g6956.t1 0.8892301484997857 46 Cpa|evm.model.tig00020918.12 Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana tig00020918_g15889.t1 0.8883969685657587 74 Cpa|evm.model.tig00021435.18 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB deconjugation of neddylated cullin.COP9 signalosome complex.CSN5 component tig00021435_g21395.t1 0.8880606945262013 48 Cpa|evm.model.tig00021612.39 tig00021612_g22881.t1 0.8878666581794655 49 Cpa|evm.model.tig00000219.44 RNA biosynthesis.RNA polymerase II-dependent transcription.pre-initiation complex.TFIIf basal transcription factor complex.beta subunit tig00000219_g19483.t1 0.8872055934965973 50 Cpa|evm.model.tig00020675.94 tig00020675_g12677.t1 0.8870108789223712 51 Cpa|evm.model.tig00020903.30 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT2 beta subunit tig00020903_g15096.t1 0.8862507262828506 52 Cpa|evm.model.tig00000789.36 Protein translocation.nucleus.nucleocytoplasmic transport.RanBP1 GTPase activation accessory protein tig00000789_g4130.t1 0.8852576483910892 53 Cpa|evm.model.tig00001234.10 Protein modification.phosphorylation.CMGC kinase superfamily.MAPK kinase tig00001234_g7732.t1 0.884942132209716 61 Cpa|evm.model.tig00000350.28 Chromatin organisation.chromatin remodeling complexes.RVB helicase component tig00000350_g24328.t1 0.8846926141438309 62 Cpa|evm.model.tig00021254.24 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP54 component tig00021254_g19703.t1 0.8844574969622944 56 Cpa|evm.model.tig00020589.5 Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS26 component tig00020589_g11619.t1 0.8838231862865435 57 Cpa|evm.model.tig00021464.27 tig00021464_g21733.t1 0.8822803994409332 58 Cpa|evm.model.tig00020614.5 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN3 regulatory component tig00020614_g12118.t1 0.8820634189838765 60 Cpa|evm.model.tig00020553.144 Chromatin organisation.histone modifications.histone acetylation.MYST-type histone acetyltransferase tig00020553_g10634.t1 0.8818151357139806 61 Cpa|evm.model.tig00000792.7 Protein degradation.peptide tagging.Related-to-Ubiquitin (RUB/NEDD8)-anchor modification (neddylation).RUB ligase E3 activities.RUB ligase E3 protein (RBX1) tig00000792_g4156.t1 0.8812638299099409 62 Cpa|evm.model.tig00001206.4 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 333.7) & Phosphoglycerate kinase 3, cytosolic OS=Arabidopsis thaliana tig00001206_g7487.t1 0.8799474134383017 63 Cpa|evm.model.tig00000821.8 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.p24-delta regulator protein tig00000821_g4467.t1 0.8798178846123065 64 Cpa|evm.model.tig00000615.68 Ras-related protein RABA4a OS=Arabidopsis thaliana tig00000615_g2598.t1 0.8797929418806314 65 Cpa|evm.model.tig00001590.11 tig00001590_g9383.t1 0.879244822744275 66 Cpa|evm.model.tig00021612.44 tig00021612_g22885.t1 0.8791470046129831 78 Cpa|evm.model.tig00020684.31 Serine/threonine-protein phosphatase PP-X isozyme 2 OS=Arabidopsis thaliana tig00020684_g12880.t1 0.8773036721712415 68 Cpa|evm.model.tig00000857.6 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp90 family.P23 Hsp90-co-chaperone tig00000857_g4927.t1 0.87711210633154 69 Cpa|evm.model.tig00021348.86 Translocase of chloroplast 34 OS=Pisum sativum tig00021348_g20595.t1 0.8760048244297178 70 Cpa|evm.model.tig00001600.10 Enzyme classification.EC_5 isomerases.EC_5.3 intramolecular oxidoreductase(50.5.3 : 314.8) & Triosephosphate isomerase, chloroplastic OS=Secale cereale tig00001600_g9395.t1 0.8757637011577242 71 Cpa|evm.model.tig00021357.13 tig00021357_g20746.t1 0.8743623423582707 72 Cpa|evm.model.tig00022075.52 14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana tig00022075_g23613.t1 0.8742138498429671 73 Cpa|evm.model.tig00000545.18 Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN12 regulatory component tig00000545_g1991.t1 0.8740004663185121 74 Cpa|evm.model.tig00020675.2 Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBC-conjugating E2 protein tig00020675_g12580.t1 0.8733588868713216 75 Cpa|evm.model.tig00020903.37 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP export.TREX/THO mRNP trafficking complex.CIP29/Tho1 component tig00020903_g15104.t1 0.8728680277451758 76 Cpa|evm.model.tig00001030.11 Enzyme classification.EC_2 transferases.EC_2.7 transferase transferring phosphorus-containing group(50.2.7 : 263.1) & Calcium-dependent protein kinase 10 OS=Oryza sativa subsp. japonica tig00001030_g6452.t1 0.8720885157461118 77 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein tig00020614_g12219.t1 0.8718310215864956 78 Cpa|evm.model.tig00000073.32 Oligoribonuclease OS=Arabidopsis thaliana tig00000073_g1714.t1 0.871741079064418 79 Cpa|evm.model.tig00001408.10 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.D-class RAB GTPase tig00001408_g8605.t1 0.869902461402761 80 Cpa|evm.model.tig00000241.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF3 component tig00000241_g20883.t1 0.8696452832580377 81 Cpa|evm.model.tig00020553.163 Cytoskeleton.microtubular network.Kinesin microtubule-based motor protein activities.Kinesin-13 motor protein tig00020553_g10655.t1 0.8692310042775393 83 Cpa|evm.model.tig00020934.50 tig00020934_g16118.t1 0.8690464312089721 84 Cpa|evm.model.tig00020553.158 Cell cycle.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-dependent pathway.MUS81-EME1 Holliday junction cleavage heterodimer.MUS81 component tig00020553_g10649.t1 0.8686543621166724 85 Cpa|evm.model.tig00001600.14 tig00001600_g9399.t1 0.8675041982592391 87 Cpa|evm.model.tig00021435.44 Calmodulin OS=Mougeotia scalaris tig00021435_g21427.t1 0.866720402302207 88 Cpa|evm.model.tig00001094.30 Transcription elongation factor 1 homolog OS=Oryza sativa subsp. japonica tig00001094_g7002.t1 0.8660693757344957 90 Cpa|evm.model.tig00001049.12 tig00001049_g6662.t1 0.8655515001685644 99 Cpa|evm.model.tig00000802.47 26S proteasome non-ATPase regulatory subunit 13 homolog B OS=Arabidopsis thaliana tig00000802_g4296.t1 0.8652422706791568 92 Cpa|evm.model.tig00021326.40 tig00021326_g20304.t1 0.8651590286457715 93 Cpa|evm.model.tig00000789.37 Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT6 zeta subunit tig00000789_g4131.t1 0.863836214957578 94 Cpa|evm.model.tig00001542.19 tig00001542_g9326.t1 0.8637515525257394 95 Cpa|evm.model.tig00000042.86 Vesicle trafficking.SNARE target membrane recognition and fusion complexes.R-type SNARE longin components.SEC22-type protein tig00000042_g15484.t1 0.8635087403607733 96 Cpa|evm.model.tig00020848.77 tig00020848_g14607.t1 0.8633518827215152 98 Cpa|evm.model.tig00021127.182 Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.C-class RAB GTPase tig00021127_g18866.t1 0.8632323896589523 99 Cpa|evm.model.tig00000144.125 Calcineurin B-like protein 2 OS=Arabidopsis thaliana tig00000144_g9120.t1 0.8629209101338186 100