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  5. Transcript_contig_59712

Transcript_contig_59712 (59712)


Aliases : 59712

Description : CybS, succinate dehydrogenase cytochrome B small subunit [Interproscan].


Gene families : OG_01_0003989 (OrthoFinder) Phylogenetic Tree(s): OG0003989_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_59712
Cluster HCCA: Cluster_85

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01002082.1_cds_GFH22620.1_17097 HaLaN_20114, GFH22620 Succinate dehydrogenase [ubiquinone] cytochrome b small subunit 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004197 cysteine-type endopeptidase activity IEP Enrichment
MF GO:0005215 transporter activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005261 cation channel activity IEP Enrichment
MF GO:0005337 nucleoside transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006952 defense response IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008324 cation transmembrane transporter activity IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
BP GO:0015693 magnesium ion transport IEP Enrichment
BP GO:0015858 nucleoside transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0016485 protein processing IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0022857 transmembrane transporter activity IEP Enrichment
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
BP GO:1901642 nucleoside transmembrane transport IEP Enrichment

No InterPro domains available for this sequence

No external refs found!