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  5. Transcript_contig_59153

Transcript_contig_59153 (59153)


Aliases : 59153

Description : SET domain [Interproscan].


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_59153
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000737.18 tig00000737_g3797.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00020563.9 tig00020563_g11190.t1 No description available 0.01 OrthoFinder
Cz14g02180.t1 No alias SET domain [Interproscan]. 0.01 OrthoFinder
EOD11074 No alias Hypothetical protein [Ensembl]. 0.02 OrthoFinder
Sro1118_g243070.1 Contig728.g8385 Zinc finger, MYND-type [Interproscan]. 0.01 OrthoFinder
Sro2044_g312370.1 Contig1368.g12582 SET domain 0.02 OrthoFinder
SymbC1.scaffold5215.4 5215.4 SET domain [Interproscan]. 0.01 OrthoFinder
TP09G01880.1 No alias SET domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000228 nuclear chromosome IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006338 chromatin remodeling IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 340 426
No external refs found!