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  5. Transcript_contig_59001

Transcript_contig_59001 (59001)


Aliases : 59001

Description : Endoplasmic reticulum resident protein 29, C-terminal; Thioredoxin domain [Interproscan].


Gene families : OG_01_0000092 (OrthoFinder) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_59001
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000704.52 tig00000704_g3339.t1 Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana 0.02 OrthoFinder
Cpa|evm.model.tig00001038.3 tig00001038_g6513.t1 Protein disulfide isomerase-like 2-2 OS=Oryza sativa... 0.03 OrthoFinder
Cre01.g033550 30788638, PDI2 Protein disulfide-isomerase like 2-1 OS=Arabidopsis thaliana 0.05 OrthoFinder
Cre16.g692751 30777894 Protein disulfide-isomerase 5-1 OS=Arabidopsis thaliana 0.01 OrthoFinder
Cre17.g712850 30781739 No description available 0.03 OrthoFinder
PTI_01G05040.1 No alias Thioredoxin-like domain; Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
PTI_06G01450.1 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
Sro1186_g250390.1 Contig3178.g25125 Disulfide-isomerase-like protein EhSep2 0.02 OrthoFinder
Sro1401_g269410.1 Contig1376.g12625 Protein disulfide isomerase 0.01 OrthoFinder
Sro2542_g330690.1 Contig739.g8469 Protein disulfide isomerase 0.02 OrthoFinder
Sro427_g140580.1 Contig2653.g21429 Disulfide-isomerase-like protein EhSep2 0.01 OrthoFinder
Sro446_g144770.1 Contig1578.g14346 Disulfide-isomerase-like protein EhSep2 0.01 OrthoFinder
Sro545_g163770.1 Contig1180.g11220 Protein disulfide isomerase 0.02 OrthoFinder
TP03G07960.1 No alias Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
TP12G03050.1 No alias Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
TP14G03050.1 No alias Thioredoxin domain [Interproscan]. 0.03 OrthoFinder
TP14G03210.1 No alias Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
TP14G03220.1 No alias Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
XM_002500916.1 MICPUN_112673, 112673 Protein disulfide isomerase (PDI) 0.01 OrthoFinder
XM_002504707.1 MICPUN_61638, 61638 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
XM_003059389.1 MicpuC2_58672, 58672 Thioredoxin domain [Interproscan]. 0.02 OrthoFinder
XM_003061810.1 MicpuC2_51489, 51489 Thioredoxin domain [Interproscan]. 0.01 OrthoFinder
XM_003063183.1 MicpuC2_48821, 48821 Thioredoxin domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005783 endoplasmic reticulum IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003756 protein disulfide isomerase activity IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0003779 actin binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
MF GO:0005534 galactose binding IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006457 protein folding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007010 cytoskeleton organization IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044265 cellular macromolecule catabolic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
MF GO:0048029 monosaccharide binding IEP Enrichment
MF GO:0051082 unfolded protein binding IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 32 139
IPR011679 ERp29_C 150 242
No external refs found!