Transcript_contig_58846 (58846)


Aliases : 58846

Description : Cofactor of BRCA1 [Interproscan].


Gene families : OG_01_0004573 (OrthoFinder) Phylogenetic Tree(s): OG0004573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58846
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
Cz06g19130.t1 No alias Cofactor of BRCA1 [Interproscan]. 0.02 OrthoFinder
OT_05G03390.1 No alias Cofactor of BRCA1 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
BP GO:0045892 negative regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
CC GO:0000151 ubiquitin ligase complex IEP Enrichment
CC GO:0000152 nuclear ubiquitin ligase complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003980 UDP-glucose:glycoprotein glucosyltransferase activity IEP Enrichment
MF GO:0005096 GTPase activator activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
CC GO:0005680 anaphase-promoting complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006486 protein glycosylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007346 regulation of mitotic cell cycle IEP Enrichment
MF GO:0008047 enzyme activator activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010564 regulation of cell cycle process IEP Enrichment
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030119 AP-type membrane coat adaptor complex IEP Enrichment
CC GO:0030131 clathrin adaptor complex IEP Enrichment
MF GO:0030234 enzyme regulator activity IEP Enrichment
MF GO:0030695 GTPase regulator activity IEP Enrichment
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Enrichment
MF GO:0031625 ubiquitin protein ligase binding IEP Enrichment
BP GO:0033043 regulation of organelle organization IEP Enrichment
BP GO:0033044 regulation of chromosome organization IEP Enrichment
BP GO:0033045 regulation of sister chromatid segregation IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043248 proteasome assembly IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0043413 macromolecule glycosylation IEP Enrichment
MF GO:0043565 sequence-specific DNA binding IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044267 cellular protein metabolic process IEP Enrichment
MF GO:0044389 ubiquitin-like protein ligase binding IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051128 regulation of cellular component organization IEP Enrichment
BP GO:0051726 regulation of cell cycle IEP Enrichment
BP GO:0051983 regulation of chromosome segregation IEP Enrichment
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0070085 glycosylation IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0098772 molecular function regulator IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
CC GO:0140535 intracellular protein-containing complex IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
BP GO:1901987 regulation of cell cycle phase transition IEP Enrichment
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Enrichment
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Enrichment
BP GO:1905818 regulation of chromosome separation IEP Enrichment
CC GO:1990234 transferase complex IEP Enrichment
InterPro domains Description Start Stop
IPR010405 COBRA1 122 323
IPR010405 COBRA1 375 629
No external refs found!