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  5. Transcript_contig_58797

Transcript_contig_58797 (58797)


Aliases : 58797

Description : Peptidase M3A/M3B catalytic domain [Interproscan].


Gene families : OG_01_0000375 (OrthoFinder) Phylogenetic Tree(s): OG0000375_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58797
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
Cre02.g073300 30786155 No description available 0.01 OrthoFinder
Cre13.g572900 30784293 Protein degradation.peptidase families.metallopeptidase... 0.02 OrthoFinder
Cz08g03120.t1 No alias Peptidase M3A/M3B catalytic domain [Interproscan]. 0.02 OrthoFinder
Dusal.0449s00010.1 33190872 Peptidase M3A/M3B catalytic domain [Interproscan]. 0.02 OrthoFinder
PTI_01G04770.1 No alias Peptidase M3A/M3B catalytic domain [Interproscan]. 0.02 OrthoFinder
Sro82_g043890.1 Contig4032.g30980 Organellar oligopeptidase A, chloroplastic/mitochondrial 0.01 OrthoFinder
TP17G01130.1 No alias Peptidase M3A/M3B catalytic domain [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0203.1 32884223 Peptidase M3A/M3B catalytic domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000019.1_cds_PRW32540.1_4063 PRW32540 Putative mitochondrial intermediate mitochondrial 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004222 metalloendopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004527 exonuclease activity IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
MF GO:0008408 3'-5' exonuclease activity IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Enrichment
BP GO:0019941 modification-dependent protein catabolic process IEP Enrichment
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
InterPro domains Description Start Stop
IPR001567 Pept_M3A_M3B_dom 303 473
No external refs found!