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  5. Transcript_contig_58753

Transcript_contig_58753 (58753)


Aliases : 58753

Description : ATPase, V0 complex, c/d subunit [Interproscan].


Gene families : OG_01_0003693 (OrthoFinder) Phylogenetic Tree(s): OG0003693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58753
Cluster HCCA: Cluster_186

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000113.64 tig00000113_g5641.t1 Solute transport.primary active transport.V-type ATPase... 0.02 OrthoFinder
Cre03.g176250 30787498, ATPvD1 Solute transport.primary active transport.V-type ATPase... 0.02 OrthoFinder
Cz01g26130.t1 No alias ATPase, V0 complex, c/d subunit [Interproscan]. 0.02 OrthoFinder
Sro196_g083480.1 Contig3206.g25344 Proton ATPase subunit d 0.01 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494840.1_3370 KAA8494840 V-type proton ATPase subunit d 1 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Enrichment
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003872 6-phosphofructokinase activity IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0005525 GTP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005634 nucleus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006355 regulation of transcription, DNA-templated IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006810 transport IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008443 phosphofructokinase activity IEP Enrichment
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Enrichment
BP GO:0009889 regulation of biosynthetic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010468 regulation of gene expression IEP Enrichment
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
BP GO:0016192 vesicle-mediated transport IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0016872 intramolecular lyase activity IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019001 guanyl nucleotide binding IEP Enrichment
MF GO:0019200 carbohydrate kinase activity IEP Enrichment
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
BP GO:0030001 metal ion transport IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031326 regulation of cellular biosynthetic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Enrichment
MF GO:0032561 guanyl ribonucleotide binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050794 regulation of cellular process IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051179 localization IEP Enrichment
BP GO:0051234 establishment of localization IEP Enrichment
BP GO:0051252 regulation of RNA metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0120227 acyl-CoA binding IEP Enrichment
MF GO:1901567 fatty acid derivative binding IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
BP GO:2001141 regulation of RNA biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002843 ATPase_V0-cplx_csu/dsu 27 255
No external refs found!