Transcript_contig_58561 (58561)

Aliases : 58561

Description : Uroporphyrinogen decarboxylase (URO-D) [Interproscan].

Gene families : OG_01_0000468 (OrthoFinder) Phylogenetic Tree(s): OG0000468_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Transcript_contig_58561
Cluster	HCCA: Cluster_36

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021319.48	tig00021319_g20242.t1	Coenzyme metabolism.tetrapyrrol...	0.03	OrthoFinder
Cre02.g073700	30785831, UPD3	Coenzyme metabolism.tetrapyrrol...	0.04	OrthoFinder
Cre02.g076300	30785008, UPD2	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder
Cre11.g467700	30776050, UPD1	Coenzyme metabolism.tetrapyrrol...	0.02	OrthoFinder
Cz14g23190.t1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.04	OrthoFinder
Cz16g13070.t1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.05	OrthoFinder
Dusal.0040s00025.1	33197281	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.04	OrthoFinder
Dusal.0096s00026.1	33195840	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.03	OrthoFinder
EOD08597	No alias	Uroporphyrinogen decarboxylase [Ensembl].	0.02	OrthoFinder
EOD39324	No alias	Uroporphyrinogen decarboxylase [Ensembl].	0.02	OrthoFinder
OT_01G03410.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.04	OrthoFinder
OT_12G02430.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.03	OrthoFinder
OT_17G00160.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.03	OrthoFinder
PTI_04G05280.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.03	OrthoFinder
PTI_10G00460.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.03	OrthoFinder
Sro1503_g278020.1	Contig1159.g11075	Uroporphyrinogen decarboxylase	0.02	OrthoFinder
Sro350_g123690.1	Contig1556.g14139	Uroporphyrinogen decarboxylase	0.02	OrthoFinder
Sro80_g043120.1	Contig92.g1056	Uroporphyrinogen decarboxylase	0.02	OrthoFinder
TP02G01280.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.02	OrthoFinder
TP03G09170.1	No alias	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.02	OrthoFinder
Vocar.0012s0224.1	32894830	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.06	OrthoFinder
Vocar.0056s0027.1	32896685	Uroporphyrinogen decarboxylase (URO-D) [Interproscan].	0.04	OrthoFinder
XM_003055316.1	MicpuC2_49908, 49908	Uroporphyrinogen decarboxylase chloroplast precursor (HEME1)	0.02	OrthoFinder
lcl\|BLLF01000412.1_cds_GFH11531.1_6008	HaLaN_07044, GFH11531	Uroporphyrinogen decarboxylase	0.05	OrthoFinder
lcl\|BLLF01000728.1_cds_GFH14454.1_8931	HaLaN_10514, GFH14454	Uroporphyrinogen decarboxylase	0.02	OrthoFinder
lcl\|BLLF01001154.1_cds_GFH17479.1_11956	HaLaN_14128, GFH17479	Uroporphyrinogen decarboxylase	0.06	OrthoFinder
lcl\|BLLF01004293.1_cds_GFH29329.1_23806	HaLaN_27970, GFH29329	Uroporphyrinogen decarboxylase	0.01	OrthoFinder
lcl\|LHPG02000011.1_cds_PRW45352.1_1514	PRW45352	Uroporphyrinogen decarboxylase chloroplast precursor	0.04	OrthoFinder
lcl\|LHPG02000026.1_cds_PRW18323.1_5795	PRW18323	Uroporphyrinogen decarboxylase	0.04	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004853	uroporphyrinogen decarboxylase activity	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	None	Extended
MF	GO:0016831	carboxy-lyase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004418	hydroxymethylbilane synthase activity	IEP	Enrichment
MF	GO:0004601	peroxidase activity	IEP	Enrichment
MF	GO:0004602	glutathione peroxidase activity	IEP	Enrichment
BP	GO:0006950	response to stress	IEP	Enrichment
BP	GO:0006979	response to oxidative stress	IEP	Enrichment
MF	GO:0016209	antioxidant activity	IEP	Enrichment
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Enrichment
BP	GO:0050896	response to stimulus	IEP	Enrichment
MF	GO:0071949	FAD binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000257	Uroporphyrinogen_deCOase	2	187

External Links

No external refs found!

Transcript_contig_58561 (58561)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation