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  5. Transcript_contig_58396

Transcript_contig_58396 (58396)


Aliases : 58396

Description : Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA dehydrogenase/oxidase C-terminal; Acyl-CoA oxidase/dehydrogenase, central domain [Interproscan].


Gene families : OG_01_0000190 (OrthoFinder) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_58396
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000711.27 tig00000711_g3387.t1 Isovaleryl-CoA dehydrogenase, mitochondrial OS=Oryza... 0.01 OrthoFinder
Cpa|evm.model.tig00021318.60 tig00021318_g20180.t1 Amino acid metabolism.degradation.branched-chain amino... 0.01 OrthoFinder
Cre06.g296400 30778744 Amino acid metabolism.degradation.branched-chain amino... 0.02 OrthoFinder
Cre16.g695100 30776858 Lipid metabolism.lipid degradation.fatty acid... 0.04 OrthoFinder
Cz17g14150.t1 No alias Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.04 OrthoFinder
Dusal.0407s00006.1 33197900 Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.07 OrthoFinder
OT_08G00850.1 No alias Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder
PTI_03G06290.1 No alias Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.01 OrthoFinder
Sro1037_g234200.1 Contig2347.g19309 Short-chain specific acyl-CoA dehydrogenase, mitochondrial 0.02 OrthoFinder
Sro1323_g262650.1 Contig273.g3511 Short/branched chain specific acyl-CoA dehydrogenase,... 0.01 OrthoFinder
Sro1843_g301120.1 Contig4701.g34960 Short/branched chain specific acyl-CoA dehydrogenase,... 0.02 OrthoFinder
Sro762_g198700.1 Contig3620.g28011 Isovaleryl-CoA dehydrogenase, mitochondrial 0.02 OrthoFinder
SymbC1.scaffold1828.1 1828.1 Acyl-CoA dehydrogenase/oxidase, N-terminal; Cytochrome... 0.02 OrthoFinder
SymbC1.scaffold4.1618 4.1618 PEP-CTERM protein-sorting domain; Glyoxalase/fosfomycin... 0.01 OrthoFinder
TP08G03780.1 No alias Acyl-CoA dehydrogenase/oxidase C-terminal; Acyl-CoA... 0.01 OrthoFinder
Vocar.0012s0263.1 32894907 Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA... 0.02 OrthoFinder
Vocar.0029s0163.1 32887516 Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA... 0.03 OrthoFinder
XM_003055350.1 MicpuC2_13489, 13489 Cytochrome b5-like protein 0.02 OrthoFinder
lcl|BLLF01000025.1_cds_GFH06166.1_643 HaLaN_00751, GFH06166 Ig-like domain-containing protein 0.01 OrthoFinder
lcl|BLLF01004404.1_cds_GFH29539.1_24016 HaLaN_28219, GFH29539 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000003.1_cds_PRW59738.1_6309 PRW59738 Acyl-coenzyme A oxidase peroxisomal 0.03 OrthoFinder
lcl|LHPG02000011.1_cds_PRW45377.1_1372 PRW45377 Isovaleryl-mitochondrial 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495778.1_1776 KAA8495778 Isovaleryl-CoA dehydrogenase, mitochondrial 0.01 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495843.1_1841 KAA8495843 Putative short/branched chain specific acyl-CoA dehydrogenase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003997 acyl-CoA oxidase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004298 threonine-type endopeptidase activity IEP Enrichment
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Enrichment
MF GO:0004806 triglyceride lipase activity IEP Enrichment
MF GO:0005515 protein binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
CC GO:0005777 peroxisome IEP Enrichment
CC GO:0005839 proteasome core complex IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0006635 fatty acid beta-oxidation IEP Enrichment
BP GO:0007034 vacuolar transport IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009056 catabolic process IEP Enrichment
BP GO:0009062 fatty acid catabolic process IEP Enrichment
BP GO:0016042 lipid catabolic process IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016298 lipase activity IEP Enrichment
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019395 fatty acid oxidation IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
BP GO:0030258 lipid modification IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
BP GO:0032787 monocarboxylic acid metabolic process IEP Enrichment
BP GO:0034440 lipid oxidation IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
CC GO:0042579 microbody IEP Enrichment
CC GO:0043226 organelle IEP Enrichment
CC GO:0043227 membrane-bounded organelle IEP Enrichment
CC GO:0043229 intracellular organelle IEP Enrichment
CC GO:0043231 intracellular membrane-bounded organelle IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044242 cellular lipid catabolic process IEP Enrichment
BP GO:0044248 cellular catabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
BP GO:0044282 small molecule catabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0070003 threonine-type peptidase activity IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072329 monocarboxylic acid catabolic process IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
BP GO:1901575 organic substance catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 192 283
IPR013786 AcylCoA_DH/ox_N 78 186
IPR009075 AcylCo_DH/oxidase_C 301 433
No external refs found!