Transcript_contig_57634 (57634)


Aliases : 57634

Description : Hypothetical protein


Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57634
Cluster HCCA: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001093.8 tig00001093_g6883.t1 No description available 0.01 OrthoFinder
Cre09.g389541 30780648 No description available 0.02 OrthoFinder
Cz04g11280.t1 No alias RAP domain [Interproscan]. 0.02 OrthoFinder
Cz08g16170.t1 No alias Hypothetical protein 0.01 OrthoFinder
Cz11g12050.t1 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
Cz11g18250.t1 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
Cz18g13030.t1 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
Cz19g00130.t1 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
Cz19g02050.t1 No alias RAP domain [Interproscan]. 0.02 OrthoFinder
EOD08378 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
EOD25932 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
OT_08G01970.1 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
TP04G03300.1 No alias RAP domain [Interproscan]. 0.01 OrthoFinder
XM_003058842.1 MicpuC2_70781, 70781 RAP domain [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01005907.1_cds_GFH31753.1_26230 HaLaN_30858, GFH31753 RAP domain-domain-containing protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP Enrichment
MF GO:0002161 aminoacyl-tRNA editing activity IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0004484 mRNA guanylyltransferase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005730 nucleolus IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006354 DNA-templated transcription, elongation IEP Enrichment
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Enrichment
BP GO:0006370 7-methylguanosine mRNA capping IEP Enrichment
BP GO:0006396 RNA processing IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006400 tRNA modification IEP Enrichment
BP GO:0006413 translational initiation IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
CC GO:0008023 transcription elongation factor complex IEP Enrichment
BP GO:0008033 tRNA processing IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008192 RNA guanylyltransferase activity IEP Enrichment
BP GO:0009452 7-methylguanosine RNA capping IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0016311 dephosphorylation IEP Enrichment
BP GO:0016569 covalent chromatin modification IEP Enrichment
BP GO:0016570 histone modification IEP Enrichment
CC GO:0016593 Cdc73/Paf1 complex IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016763 pentosyltransferase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0034470 ncRNA processing IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0036260 RNA capping IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
MF GO:0052689 carboxylic ester hydrolase activity IEP Enrichment
MF GO:0070568 guanylyltransferase activity IEP Enrichment
BP GO:0090304 nucleic acid metabolic process IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1905354 exoribonuclease complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment

No InterPro domains available for this sequence

No external refs found!