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  5. Transcript_contig_57626

Transcript_contig_57626 (57626)


Aliases : 57626

Description : NodB homology domain [Interproscan].


Gene families : OG_01_0001088 (OrthoFinder) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_57626
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_53976 53976 NodB homology domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_56031 56031 NodB homology domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_57735 57735 NodB homology domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61361.1_387 PRW61361 Left border a 0.05 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61614.1_423 PRW61614 Chitin 0.06 OrthoFinder
lcl|LHPG02000007.1_cds_PRW57450.1_9126 PRW57450 Chitin 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56282.1_10029 PRW56282 NodB homology domain [Interproscan]. 0.06 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39180.1_2682 PRW39180 NodB homology domain [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000028.1_cds_PRW05840.1_5994 PRW05840 NodB homology domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR002509 NODB_dom 84 176
No external refs found!