1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000741.4

Cpa|evm.model.tig00000741.4 (tig00000741_g3824.t1)


Aliases : tig00000741_g3824.t1

Description : ABC transporter B family member 21 OS=Arabidopsis thaliana


Gene families : OG_01_0000036 (OrthoFinder) Phylogenetic Tree(s): OG0000036_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000741.4
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cre17.g725150 30782210 ABC transporter B family member 7 OS=Arabidopsis thaliana 0.02 OrthoFinder
EOD24007 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
EOD34923 No alias Putative ABC transporter [Ensembl]. 0.01 OrthoFinder
EOD35541 No alias Putative ABC transporter [Ensembl]. 0.02 OrthoFinder
PTI_00G00710.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.02 OrthoFinder
PTI_07G02520.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
PTI_13G02060.1 No alias ABC transporter type 1, transmembrane domain; ABC... 0.03 OrthoFinder
Sro1234_g254930.1 Contig2459.g20128 Probable microcin-H47 secretion/processing ATP-binding... 0.02 OrthoFinder
Sro157_g071300.1 Contig2362.g19420 Lactococcin transport/processing ATP-binding protein LcnC-like 0.01 OrthoFinder
Sro1916_g305200.1 Contig4310.g32500 Transporter B family member 0.03 OrthoFinder
TP03G09080.1 No alias ABC transporter-like; ABC transporter type 1,... 0.02 OrthoFinder
XM_002505231.1 MICPUN_75054, 75054 ATP-binding cassette superfamily 0.02 OrthoFinder
XM_002505595.1 MICPUN_87670, 87670 ATP-binding cassette superfamily 0.02 OrthoFinder
lcl|BLLF01000498.1_cds_GFH12386.1_6863 HaLaN_08063, GFH12386 ABC transporter-like [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006813 potassium ion transport IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0046429 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0052592 oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 365 414
IPR011527 ABC1_TM_dom 699 905
IPR011527 ABC1_TM_dom 20 297
IPR003439 ABC_transporter-like_ATP-bd 1000 1149
No external refs found!