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  5. Transcript_contig_56943

Transcript_contig_56943 (56943)


Aliases : 56943

Description : Protein kinase domain [Interproscan].


Gene families : OG_01_0000547 (OrthoFinder) Phylogenetic Tree(s): OG0000547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56943
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020800.31 tig00020800_g13749.t1 Serine/threonine-protein kinase STN8, chloroplastic... 0.02 OrthoFinder
Cpa|evm.model.tig00021127.26 tig00021127_g18704.t1 Serine/threonine-protein kinase STN7, chloroplastic... 0.01 OrthoFinder
Cre02.g120250 30785280 Protein modification.phosphorylation.CMGC kinase... 0.03 OrthoFinder
Cre12.g483650 30792500 Protein modification.phosphorylation.CMGC kinase... 0.02 OrthoFinder
Cz06g00060.t1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Cz10g22110.t1 No alias Protein kinase domain [Interproscan]. 0.03 OrthoFinder
OT_03G05470.1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
OT_10G01580.1 No alias Protein kinase domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54847 54847 FF domain; Protein kinase domain [Interproscan]. 0.02 OrthoFinder
XM_002499671.1 MICPUN_79153, 79153 Protein kinase domain [Interproscan]. 0.02 OrthoFinder
XM_003060130.1 MicpuC2_65587, 65587 Protein kinase domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000027.1_cds_PRW05929.1_5907 PRW05929 Serine threonine-kinase chloroplastic 0.03 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495672.1_1670 KAA8495672 Serine/threonine-protein kinase STN7, chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0004180 carboxypeptidase activity IEP Enrichment
MF GO:0004185 serine-type carboxypeptidase activity IEP Enrichment
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006284 base-excision repair IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
MF GO:0008238 exopeptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Enrichment
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:0070008 serine-type exopeptidase activity IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 308 381
No external refs found!