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Aliases : 56511
Description : LysM domain [Interproscan].
Gene families : OG_01_0001088 (OrthoFinder) Phylogenetic Tree(s): OG0001088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_56511 | |
| Cluster | HCCA: Cluster_101 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Transcript_contig_79832 | 79832 | NodB homology domain [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|LHPG02000001.1_cds_PRW61614.1_423 | PRW61614 | Chitin | 0.02 | OrthoFinder | |
| lcl|LHPG02000009.1_cds_PRW56282.1_10029 | PRW56282 | NodB homology domain [Interproscan]. | 0.02 | OrthoFinder | |
| lcl|LHPG02000014.1_cds_PRW39180.1_2682 | PRW39180 | NodB homology domain [Interproscan]. | 0.02 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Enrichment |
| MF | GO:0003824 | catalytic activity | IEP | Enrichment |
| MF | GO:0004175 | endopeptidase activity | IEP | Enrichment |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
| MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Enrichment |
| MF | GO:0004683 | calmodulin-dependent protein kinase activity | IEP | Enrichment |
| MF | GO:0005516 | calmodulin binding | IEP | Enrichment |
| BP | GO:0006468 | protein phosphorylation | IEP | Enrichment |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| CC | GO:0016021 | integral component of membrane | IEP | Enrichment |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016740 | transferase activity | IEP | Enrichment |
| BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
| CC | GO:0031224 | intrinsic component of membrane | IEP | Enrichment |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | Enrichment |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Enrichment |
| MF | GO:0071949 | FAD binding | IEP | Enrichment |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018392 | LysM_dom | 375 | 416 |
| No external refs found! |