Transcript_contig_56473 (56473)


Aliases : 56473

Description : Cleavage inducing molecular chaperone, Jiv; DnaJ domain [Interproscan].


Gene families : OG_01_0000003 (OrthoFinder) Phylogenetic Tree(s): OG0000003_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56473
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001384.7 tig00001384_g8555.t1 Chaperone protein dnaJ GFA2, mitochondrial... 0.01 OrthoFinder
Cre16.g695600 30776999, DNJ10 No description available 0.02 OrthoFinder
Dusal.0489s00005.1 33192703 DnaJ domain [Interproscan]. 0.02 OrthoFinder
EOD09869 No alias DnaJ-like protein [Ensembl]. 0.01 OrthoFinder
EOD33406 No alias DnaJ domain; Chaperone DnaJ, C-terminal [Interproscan]. 0.02 OrthoFinder
EOD42180 No alias DnaJ domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold4123.5 4123.5 DnaJ domain [Interproscan]. 0.01 OrthoFinder
TP10G02210.1 No alias DnaJ domain [Interproscan]. 0.01 OrthoFinder
XM_002504440.1 MICPUN_107385, 107385 DnaJ chaperone (DNAJ) 0.01 OrthoFinder
XM_003062806.1 MicpuC2_7992, 7992 DnaJ domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01000930.1_cds_GFH15991.1_10468 HaLaN_12332, GFH15991 J domain-containing protein 0.02 OrthoFinder
lcl|VRMN01000009.1_cds_KAA8492682.1_9375 KAA8492682 Chaperone protein DnaJ 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005643 nuclear pore IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005672 transcription factor TFIIA complex IEP Enrichment
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Enrichment
BP GO:0006352 DNA-templated transcription, initiation IEP Enrichment
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006644 phospholipid metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0008654 phospholipid biosynthetic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Enrichment
MF GO:0017056 structural constituent of nuclear pore IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
CC GO:0140513 nuclear protein-containing complex IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 253 314
IPR032843 Jiv 365 441
No external refs found!