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Aliases : 56266
Description : DNA photolyase, N-terminal; Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan].
Gene families : OG_01_0000085 (OrthoFinder) Phylogenetic Tree(s): OG0000085_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_56266 | |
| Cluster | HCCA: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000391.2 | tig00000391_g24833.t1 | DNA damage response.DNA repair... | 0.03 | OrthoFinder | |
| Cpa|evm.model.tig00020965.69 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.05 | OrthoFinder | |
| Cpa|evm.model.tig00020965.70 | tig00020965_g16882.t1 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.05 | OrthoFinder | |
| Cpa|evm.model.tig00021579.19 | tig00021579_g22443.t1 | Cryptochrome-1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder | |
| Cre02.g078939 | 30785814 | Cryptochrome DASH, chloroplastic/mitochondrial... | 0.04 | OrthoFinder | |
| Cz04g35200.t1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
| Cz09g17160.t1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.05 | OrthoFinder | |
| Dusal.0183s00016.1 | 33202617 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.0203s00017.1 | 33199258 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| EOD11134 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.03 | OrthoFinder | |
| EOD15451 | No alias | Putative Cry-DASH cryptochrome [Ensembl]. | 0.02 | OrthoFinder | |
| EOD19626 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| EOD24687 | No alias | Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. | 0.02 | OrthoFinder | |
| EOD31738 | No alias | Deoxyribodipyrimidine photolyase/cryptochrome [Ensembl]. | 0.02 | OrthoFinder | |
| OT_15G01070.1 | No alias | DNA photolyase, N-terminal; Cryptochrome/DNA photolyase,... | 0.04 | OrthoFinder | |
| PTI_05G04390.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| PTI_08G03200.1 | No alias | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.01 | OrthoFinder | |
| Sro2726_g335660.1 | Contig3579.g27670 | Cryptochrome DASH | 0.03 | OrthoFinder | |
| Sro580_g170080.1 | Contig2039.g17523 | Deoxyribodipyrimidine photo-lyase | 0.04 | OrthoFinder | |
| Vocar.0002s0198.1 | 32890551 | Cryptochrome/DNA photolyase, FAD-binding domain [Interproscan]. | 0.01 | OrthoFinder | |
| XM_002508739.1 | MICPUN_61974, 61974 | Cryptochrome/DNA photolyase, FAD-binding domain; DNA... | 0.02 | OrthoFinder | |
| lcl|BLLF01001533.1_cds_GFH19868.1_14345 | HaLaN_16893, GFH19868 | Photolyase/cryptochrome alpha/beta domain-containing protein | 0.03 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Enrichment |
| MF | GO:0003684 | damaged DNA binding | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0003906 | DNA-(apurinic or apyrimidinic site) endonuclease activity | IEP | Enrichment |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | Enrichment |
| MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Enrichment |
| MF | GO:0004519 | endonuclease activity | IEP | Enrichment |
| BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Enrichment |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0006259 | DNA metabolic process | IEP | Enrichment |
| BP | GO:0006281 | DNA repair | IEP | Enrichment |
| BP | GO:0006284 | base-excision repair | IEP | Enrichment |
| BP | GO:0006289 | nucleotide-excision repair | IEP | Enrichment |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Enrichment |
| BP | GO:0006508 | proteolysis | IEP | Enrichment |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Enrichment |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0006950 | response to stress | IEP | Enrichment |
| BP | GO:0006952 | defense response | IEP | Enrichment |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Enrichment |
| BP | GO:0008150 | biological_process | IEP | Enrichment |
| BP | GO:0008152 | metabolic process | IEP | Enrichment |
| MF | GO:0008233 | peptidase activity | IEP | Enrichment |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0009314 | response to radiation | IEP | Enrichment |
| BP | GO:0009411 | response to UV | IEP | Enrichment |
| BP | GO:0009416 | response to light stimulus | IEP | Enrichment |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Enrichment |
| BP | GO:0009987 | cellular process | IEP | Enrichment |
| BP | GO:0016070 | RNA metabolic process | IEP | Enrichment |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Enrichment |
| MF | GO:0016787 | hydrolase activity | IEP | Enrichment |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| BP | GO:0033554 | cellular response to stress | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0042558 | pteridine-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044237 | cellular metabolic process | IEP | Enrichment |
| BP | GO:0044238 | primary metabolic process | IEP | Enrichment |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Enrichment |
| BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Enrichment |
| BP | GO:0046434 | organophosphate catabolic process | IEP | Enrichment |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Enrichment |
| MF | GO:0047952 | glycerol-3-phosphate dehydrogenase [NAD(P)+] activity | IEP | Enrichment |
| BP | GO:0050896 | response to stimulus | IEP | Enrichment |
| BP | GO:0051716 | cellular response to stimulus | IEP | Enrichment |
| BP | GO:0052646 | alditol phosphate metabolic process | IEP | Enrichment |
| BP | GO:0071704 | organic substance metabolic process | IEP | Enrichment |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Enrichment |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Enrichment |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Enrichment |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Enrichment |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Enrichment |
| No external refs found! |