Transcript_contig_56168 (56168)


Aliases : 56168

Description : Hypothetical protein


Gene families : OG_01_0000346 (OrthoFinder) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_56168
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Cre16.g692650 30777217, CGL4 No description available 0.01 OrthoFinder
Transcript_contig_13580 13580 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_4643 4643 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_55818 55818 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_55861 55861 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_59611 59611 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56730.1_9650 PRW56730 Hypothetical protein 0.07 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56859.1_9509 PRW56859 Secretion-regulating guanine nucleotide exchange factor 0.02 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56272.1_9923 PRW56272 Hypothetical protein 0.01 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44483.1_2234 PRW44483 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33184.1_3416 PRW33184 Hypothetical protein 0.02 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33185.1_3417 PRW33185 Hypothetical protein 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004100 chitin synthase activity IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006022 aminoglycan metabolic process IEP Enrichment
BP GO:0006023 aminoglycan biosynthetic process IEP Enrichment
BP GO:0006030 chitin metabolic process IEP Enrichment
BP GO:0006031 chitin biosynthetic process IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006325 chromatin organization IEP Enrichment
BP GO:0006334 nucleosome assembly IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
MF GO:0008194 UDP-glycosyltransferase activity IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008375 acetylglucosaminyltransferase activity IEP Enrichment
BP GO:0008608 attachment of spindle microtubules to kinetochore IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0034728 nucleosome organization IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0046349 amino sugar biosynthetic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0051315 attachment of mitotic spindle microtubules to kinetochore IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0065004 protein-DNA complex assembly IEP Enrichment
BP GO:0071824 protein-DNA complex subunit organization IEP Enrichment
BP GO:1901071 glucosamine-containing compound metabolic process IEP Enrichment
BP GO:1901073 glucosamine-containing compound biosynthetic process IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!