Transcript_contig_56031 (56031)

Aliases : 56031

Description : NodB homology domain [Interproscan].

Gene families : OG_01_0001088 (OrthoFinder) Phylogenetic Tree(s): OG0001088_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Transcript_contig_56031
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_53976 53976 NodB homology domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_57626 57626 NodB homology domain [Interproscan]. 0.03 OrthoFinder
Transcript_contig_78124 78124 NodB homology domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_79832 79832 NodB homology domain [Interproscan]. 0.02 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61614.1_423 PRW61614 Chitin 0.05 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56282.1_10029 PRW56282 NodB homology domain [Interproscan]. 0.05 OrthoFinder
lcl|LHPG02000014.1_cds_PRW39180.1_2682 PRW39180 NodB homology domain [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
InterPro domains Description Start Stop
IPR002509 NODB_dom 78 172
No external refs found!