Transcript_contig_55955 (55955)


Aliases : 55955

Description : Hypothetical protein


Gene families : OG_01_0000346 (OrthoFinder) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55955
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Transcript_contig_54770 54770 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56730.1_9650 PRW56730 Hypothetical protein 0.06 OrthoFinder
lcl|LHPG02000008.1_cds_PRW56859.1_9509 PRW56859 Secretion-regulating guanine nucleotide exchange factor 0.03 OrthoFinder
lcl|LHPG02000009.1_cds_PRW56272.1_9923 PRW56272 Hypothetical protein 0.04 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44483.1_2234 PRW44483 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33184.1_3416 PRW33184 Hypothetical protein 0.03 OrthoFinder
lcl|LHPG02000017.1_cds_PRW33185.1_3417 PRW33185 Hypothetical protein 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Enrichment
CC GO:0000775 chromosome, centromeric region IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0004175 endopeptidase activity IEP Enrichment
MF GO:0004252 serine-type endopeptidase activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0007049 cell cycle IEP Enrichment
MF GO:0008061 chitin binding IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0030246 carbohydrate binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
CC GO:0098687 chromosomal region IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment

No InterPro domains available for this sequence

No external refs found!