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  5. Transcript_contig_55911

Transcript_contig_55911 (55911)


Aliases : 55911

Description : Protein kinase domain [Interproscan].


Gene families : OG_01_0000136 (OrthoFinder) Phylogenetic Tree(s): OG0000136_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55911
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001307.3 tig00001307_g8118.t1 Protein modification.phosphorylation.STE kinase... 0.01 OrthoFinder
Cre17.g733300 30782069 Protein modification.phosphorylation.STE kinase... 0.02 OrthoFinder
Dusal.0042s00009.1 33189884 Protein kinase domain [Interproscan]. 0.06 OrthoFinder
PTI_30G00650.1 No alias Protein kinase domain [Interproscan]. 0.03 OrthoFinder
Sro807_g205330.1 Contig531.g6919 Activated protein kinase catalytic subunit alpha-1 0.03 OrthoFinder
SymbC1.scaffold2454.1 2454.1 Protein kinase domain [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold5984.3 5984.3 Protein kinase domain [Interproscan]. 0.02 OrthoFinder
TP01G00820.1 No alias Protein kinase domain [Interproscan]. 0.03 OrthoFinder
Vocar.0003s0077.1 32889051 Protein kinase domain [Interproscan]. 0.02 OrthoFinder
XM_002500945.1 MICPUN_80084, 80084 Protein kinase domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003333.1_cds_GFH27050.1_21527 HaLaN_25308, GFH27050 Protein kinase domain-containing protein 0.03 OrthoFinder
lcl|BLLF01004008.1_cds_GFH28725.1_23202 HaLaN_27264, GFH28725 Protein kinase domain-containing protein 0.03 OrthoFinder
lcl|LHPG02000001.1_cds_PRW61141.1_408 PRW61141 Mitogen-activated kinase kinase kinase NPK1 isoform X1 0.07 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497397.1_1126 KAA8497397 Serine/threonine-protein kinase pakC 0.05 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494695.1_3225 KAA8494695 Serine/threonine-protein kinase pakC 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006468 protein phosphorylation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000776 kinetochore IEP Enrichment
CC GO:0000796 condensin complex IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006323 DNA packaging IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
BP GO:0007076 mitotic chromosome condensation IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
BP GO:0022402 cell cycle process IEP Enrichment
BP GO:0030261 chromosome condensation IEP Enrichment
CC GO:0031262 Ndc80 complex IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
CC GO:0099080 supramolecular complex IEP Enrichment
BP GO:1903047 mitotic cell cycle process IEP Enrichment
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 127 391
No external refs found!