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  5. Transcript_contig_55811

Transcript_contig_55811 (55811)


Aliases : 55811

Description : GTPase Der, C-terminal KH-domain-like; GTP binding domain [Interproscan].


Gene families : OG_01_0000636 (OrthoFinder) Phylogenetic Tree(s): OG0000636_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Transcript_contig_55811
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cz03g34150.t1 No alias GTPase Der, C-terminal KH-domain-like; Transcription... 0.01 OrthoFinder
EOD10617 No alias GTPase Der, C-terminal KH-domain-like; GTP binding... 0.01 OrthoFinder
TP01G08460.1 No alias GTPase Der, C-terminal KH-domain-like; GTP binding... 0.01 OrthoFinder
Transcript_contig_59772 59772 GTP binding domain [Interproscan]. 0.01 OrthoFinder
Transcript_contig_6724 6724 GTP binding domain [Interproscan]. 0.01 OrthoFinder
Vocar.0015s0144.1 32898846 GTPase Der, C-terminal KH-domain-like; GTP binding... 0.02 OrthoFinder
XM_002509200.1 MICPUN_98167, 98167 GTP binding domain; GTPase Der, C-terminal... 0.02 OrthoFinder
lcl|BLLF01000810.1_cds_GFH15133.1_9610 HaLaN_11303, GFH15133 GTP binding domain [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8495072.1_3602 KAA8495072 GTPase Der 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
InterPro domains Description Start Stop
IPR032859 KH_dom-like 597 677
IPR006073 GTP-bd 417 538
IPR006073 GTP-bd 219 353
No external refs found!