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  5. Transcript_contig_55783

Transcript_contig_55783 (55783)


Aliases : 55783

Description : UbiB domain [Interproscan].


Gene families : OG_01_0000167 (OrthoFinder) Phylogenetic Tree(s): OG0000167_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55783
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000144.28 tig00000144_g9017.t1 Protein modification.phosphorylation.atypical kinase... 0.01 OrthoFinder
Cpa|evm.model.tig00020660.19 tig00020660_g12512.t1 Protein modification.phosphorylation.atypical kinase... 0.01 OrthoFinder
Cre03.g158500 30787514 Protein modification.phosphorylation.atypical kinase... 0.04 OrthoFinder
Cre06.g269801 30779971 Protein modification.phosphorylation.atypical kinase... 0.02 OrthoFinder
Cz04g39100.t1 No alias UbiB domain [Interproscan]. 0.01 OrthoFinder
Cz12g16050.t1 No alias UbiB domain [Interproscan]. 0.02 OrthoFinder
Cz13g12010.t1 No alias UbiB domain [Interproscan]. 0.03 OrthoFinder
EOD03895 No alias UbiB domain; Aminoglycoside phosphotransferase [Interproscan]. 0.02 OrthoFinder
EOD20485 No alias UbiB domain [Interproscan]. 0.01 OrthoFinder
EOD40871 No alias Hypothetical protein [Ensembl]. 0.03 OrthoFinder
OT_06G03160.1 No alias UbiB domain [Interproscan]. 0.02 OrthoFinder
OT_07G01860.1 No alias UbiB domain; Aminoglycoside phosphotransferase [Interproscan]. 0.02 OrthoFinder
PTI_11G03080.1 No alias UbiB domain; Aminoglycoside phosphotransferase [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold510.9 510.9 Hypothetical protein 0.02 OrthoFinder
Transcript_contig_54775 54775 Hypothetical protein 0.01 OrthoFinder
Transcript_contig_56243 56243 UbiB domain [Interproscan]. 0.01 OrthoFinder
Vocar.0002s0174.1 32891251 UbiB domain [Interproscan]. 0.02 OrthoFinder
XM_002499557.1 MICPUN_78920, 78920 UbiB domain [Interproscan]. 0.01 OrthoFinder
XM_002502095.1 MICPUN_65888, 65888 UbiB domain [Interproscan]. 0.01 OrthoFinder
XM_003055507.1 MicpuC2_50326, 50326 UbiB domain; Aminoglycoside phosphotransferase [Interproscan]. 0.02 OrthoFinder
XM_003058175.1 MicpuC2_45469, 45469 UbiB domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000013.1_cds_PRW44567.1_2238 PRW44567 Putative aarF domain-containing kinase chloroplastic 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Enrichment
BP GO:0000097 sulfur amino acid biosynthetic process IEP Enrichment
MF GO:0000166 nucleotide binding IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
BP GO:0006790 sulfur compound metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
MF GO:0008172 S-methyltransferase activity IEP Enrichment
BP GO:0008652 cellular amino acid biosynthetic process IEP Enrichment
MF GO:0008705 methionine synthase activity IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Enrichment
BP GO:0009086 methionine biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042084 5-methyltetrahydrofolate-dependent methyltransferase activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044272 sulfur compound biosynthetic process IEP Enrichment
BP GO:0044283 small molecule biosynthetic process IEP Enrichment
BP GO:0046394 carboxylic acid biosynthetic process IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901605 alpha-amino acid metabolic process IEP Enrichment
BP GO:1901607 alpha-amino acid biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004147 UbiB_dom 221 340
No external refs found!