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  5. Transcript_contig_55348

Transcript_contig_55348 (55348)


Aliases : 55348

Description : Hypothetical protein


Gene families : OG_01_0000641 (OrthoFinder) Phylogenetic Tree(s): OG0000641_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55348
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
Cz09g25140.t1 No alias BEACH domain; Pyrrolo-quinoline quinone repeat [Interproscan]. 0.01 OrthoFinder
EOD19568 No alias BEACH domain [Interproscan]. 0.01 OrthoFinder
OT_04G03470.1 No alias PH-BEACH domain; Domain of unknown function DUF4704;... 0.02 OrthoFinder
PTI_04G02200.1 No alias BEACH domain; PH-BEACH domain [Interproscan]. 0.01 OrthoFinder
Sro1247_g255870.3 No alias BEACH domain; PH-BEACH domain [Interproscan]. 0.02 OrthoFinder
Sro1730_g294110.1 Contig2449.g20048 Lipopolysaccharide-responsive and beige-like anchor protein 0.02 OrthoFinder
Sro639_g179700.1 Contig197.g2291 Lipopolysaccharide-responsive and beige-like anchor protein 0.01 OrthoFinder
TP13G00130.1 No alias BEACH domain [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009966 regulation of signal transduction IEP Enrichment
BP GO:0010646 regulation of cell communication IEP Enrichment
CC GO:0016021 integral component of membrane IEP Enrichment
BP GO:0023051 regulation of signaling IEP Enrichment
CC GO:0031224 intrinsic component of membrane IEP Enrichment
BP GO:0032012 regulation of ARF protein signal transduction IEP Enrichment
BP GO:0046578 regulation of Ras protein signal transduction IEP Enrichment
BP GO:0048583 regulation of response to stimulus IEP Enrichment
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Enrichment
BP GO:1902531 regulation of intracellular signal transduction IEP Enrichment

No InterPro domains available for this sequence

No external refs found!