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  5. Transcript_contig_55329

Transcript_contig_55329 (55329)


Aliases : 55329

Description : Polyprenyl synthetase [Interproscan].


Gene families : OG_01_0002054 (OrthoFinder) Phylogenetic Tree(s): OG0002054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_55329
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Cre03.g207700 30787567, PPS1 Secondary metabolism.terpenoids.mevalonate... 0.02 OrthoFinder
OT_03G02420.1 No alias Polyprenyl synthetase [Interproscan]. 0.02 OrthoFinder
Sro2235_g320180.1 Contig1457.g13349 Farnesyl pyrophosphate synthase 0.01 OrthoFinder
XM_002501263.1 MICPUN_104792, 104792 Farnesyl-pyrophosphate synthetase (FPS) 0.01 OrthoFinder
XM_003062342.1 MicpuC2_44821, 44821 Polyprenyl synthetase [Interproscan]. 0.01 OrthoFinder
lcl|BLLF01000413.1_cds_GFH11550.1_6027 HaLaN_07064, GFH11550 Geranylgeranyl pyrophosphate synthase GGPPS3 0.02 OrthoFinder
lcl|VRMN01000023.1_cds_KAA8490556.1_5922 KAA8490556 Farnesyl pyrophosphate synthase 0.02 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0008299 isoprenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
MF GO:0004807 triose-phosphate isomerase activity IEP Enrichment
CC GO:0005741 mitochondrial outer membrane IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
MF GO:0015297 antiporter activity IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016740 transferase activity IEP Enrichment
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016859 cis-trans isomerase activity IEP Enrichment
MF GO:0016860 intramolecular oxidoreductase activity IEP Enrichment
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Enrichment
BP GO:0018193 peptidyl-amino acid modification IEP Enrichment
BP GO:0018208 peptidyl-proline modification IEP Enrichment
CC GO:0019867 outer membrane IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
CC GO:0031968 organelle outer membrane IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0055085 transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
InterPro domains Description Start Stop
IPR000092 Polyprenyl_synt 1 73
No external refs found!