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Aliases : 55008
Description : TraB family [Interproscan].
Gene families : OG_01_0000457 (OrthoFinder) Phylogenetic Tree(s): OG0000457_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Transcript_contig_55008 | |
| Cluster | HCCA: Cluster_50 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cpa|evm.model.tig00000144.145 | tig00000144_g9140.t1 | No description available | 0.02 | OrthoFinder | |
| Cpa|evm.model.tig00021135.25 | tig00021135_g18947.t1 | No description available | 0.02 | OrthoFinder | |
| Cre16.g677800 | 30777487 | No description available | 0.01 | OrthoFinder | |
| Cz10g15130.t1 | No alias | TraB family [Interproscan]. | 0.02 | OrthoFinder | |
| Dusal.1416s00001.1 | 33190727 | TraB family [Interproscan]. | 0.02 | OrthoFinder | |
| Sro1902_g304460.1 | Contig632.g7672 | TraB family | 0.01 | OrthoFinder | |
| XM_002504885.1 | MICPUN_86636, 86636 | TraB family [Interproscan]. | 0.01 | OrthoFinder | |
| lcl|BLLF01001755.1_cds_GFH21058.1_15535 | HaLaN_18291, GFH21058 | Conjugal transfer protein TraB | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000096 | sulfur amino acid metabolic process | IEP | Enrichment |
| BP | GO:0000097 | sulfur amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Enrichment |
| MF | GO:0004421 | hydroxymethylglutaryl-CoA synthase activity | IEP | Enrichment |
| BP | GO:0006555 | methionine metabolic process | IEP | Enrichment |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | Enrichment |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | Enrichment |
| BP | GO:0006952 | defense response | IEP | Enrichment |
| MF | GO:0008172 | S-methyltransferase activity | IEP | Enrichment |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | Enrichment |
| BP | GO:0008652 | cellular amino acid biosynthetic process | IEP | Enrichment |
| MF | GO:0008705 | methionine synthase activity | IEP | Enrichment |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0009086 | methionine biosynthetic process | IEP | Enrichment |
| MF | GO:0015399 | primary active transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0042084 | 5-methyltetrahydrofolate-dependent methyltransferase activity | IEP | Enrichment |
| MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | Enrichment |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | Enrichment |
| MF | GO:0046912 | acyltransferase, acyl groups converted into alkyl on transfer | IEP | Enrichment |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | Enrichment |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002816 | TraB/PrgY/GumN_fam | 85 | 315 |
| No external refs found! |