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  5. Transcript_contig_54933

Transcript_contig_54933 (54933)


Aliases : 54933

Description : Thioredoxin domain; ERV/ALR sulfhydryl oxidase domain [Interproscan].


Gene families : OG_01_0001659 (OrthoFinder) Phylogenetic Tree(s): OG0001659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Transcript_contig_54933
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
Cre04.g230928 30791331 Protein modification.disulfide bond... 0.03 OrthoFinder
PTI_01G11120.1 No alias Thioredoxin domain; ERV/ALR sulfhydryl oxidase domain... 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016972 thiol oxidase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003916 DNA topoisomerase activity IEP Enrichment
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP Enrichment
CC GO:0005783 endoplasmic reticulum IEP Enrichment
BP GO:0006265 DNA topological change IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006996 organelle organization IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008080 N-acetyltransferase activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016407 acetyltransferase activity IEP Enrichment
MF GO:0016410 N-acyltransferase activity IEP Enrichment
MF GO:0016746 acyltransferase activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0051276 chromosome organization IEP Enrichment
BP GO:0071103 DNA conformation change IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 49 136
IPR017905 ERV/ALR_sulphydryl_oxidase 359 440
No external refs found!