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  5. Cpa|evm.model.tig00000704.62

Cpa|evm.model.tig00000704.62 (tig00000704_g3346.t2)


Aliases : tig00000704_g3346.t2

No description available


Gene families : OG_01_0000612 (OrthoFinder) Phylogenetic Tree(s): OG0000612_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000704.62
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
EOD29254 No alias Small-subunit processome, Utp13; WD40 repeat [Interproscan]. 0.02 OrthoFinder
OT_14G00400.1 No alias Thioredoxin domain; Phosphoadenosine phosphosulphate... 0.01 OrthoFinder
PTI_06G04180.1 No alias Small-subunit processome, Utp13; WD40 repeat [Interproscan]. 0.02 OrthoFinder
Sro1027_g232980.1 Contig109.g1249 Transducin beta-like protein 3 0.04 OrthoFinder
Vocar.0011s0002.1 32895390 WD40 repeat; Small-subunit processome, Utp13 [Interproscan]. 0.02 OrthoFinder
XM_002503015.1 MICPUN_83206, 83206 WD40 repeat; Small-subunit processome, Utp13 [Interproscan]. 0.02 OrthoFinder
XM_003058642.1 MicpuC2_518, 518 Small-subunit processome, Utp13; WD40 repeat [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000003.1_cds_KAA8495510.1_1508 KAA8495510 5'-adenylylsulfate reductase 2, chloroplastic 0.01 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006364 rRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003712 transcription coregulator activity IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004674 protein serine/threonine kinase activity IEP Enrichment
MF GO:0005488 binding IEP Enrichment
CC GO:0005667 transcription regulator complex IEP Enrichment
CC GO:0005669 transcription factor TFIID complex IEP Enrichment
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006621 protein retention in ER lumen IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
BP GO:0010921 regulation of phosphatase activity IEP Enrichment
MF GO:0016779 nucleotidyltransferase activity IEP Enrichment
BP GO:0019220 regulation of phosphate metabolic process IEP Enrichment
BP GO:0019222 regulation of metabolic process IEP Enrichment
MF GO:0019899 enzyme binding IEP Enrichment
MF GO:0019902 phosphatase binding IEP Enrichment
MF GO:0019903 protein phosphatase binding IEP Enrichment
BP GO:0031323 regulation of cellular metabolic process IEP Enrichment
BP GO:0031399 regulation of protein modification process IEP Enrichment
BP GO:0032268 regulation of cellular protein metabolic process IEP Enrichment
BP GO:0032507 maintenance of protein location in cell IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
BP GO:0035303 regulation of dephosphorylation IEP Enrichment
BP GO:0035304 regulation of protein dephosphorylation IEP Enrichment
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Enrichment
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
BP GO:0045185 maintenance of protein location IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0050790 regulation of catalytic activity IEP Enrichment
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051174 regulation of phosphorus metabolic process IEP Enrichment
BP GO:0051235 maintenance of location IEP Enrichment
BP GO:0051246 regulation of protein metabolic process IEP Enrichment
BP GO:0051336 regulation of hydrolase activity IEP Enrichment
BP GO:0051651 maintenance of location in cell IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0060255 regulation of macromolecule metabolic process IEP Enrichment
BP GO:0065009 regulation of molecular function IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072595 maintenance of protein localization in organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0080090 regulation of primary metabolic process IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:0090575 RNA polymerase II transcription regulator complex IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
MF GO:0140098 catalytic activity, acting on RNA IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR013934 SSU_processome_Utp13 6 138
No external refs found!