Sequence Description Alias PCC hrr Cpa|evm.model.tig00020538.71 RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.TAF12 component tig00020538_g10377.t1 0.9104509431235166 3 Cpa|evm.model.tig00001049.12 tig00001049_g6662.t1 0.9102373801797251 21 Cpa|evm.model.tig00001107.12 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).PRPF31 snRNP component tig00001107_g7097.t1 0.8994667034021809 48 Cpa|evm.model.tig00020614.104 Vesicle trafficking.autophagosome formation.ATG8/ATG12 conjugation system.ATG3 ATG8-conjugation E2 protein tig00020614_g12219.t1 0.8980201547197153 17 Cpa|evm.model.tig00020780.13 tig00020780_g13765.t1 0.8949729742725053 10 Cpa|evm.model.tig00020918.7 Protein degradation.peptidase families.cysteine-type peptidase activities.ubiquitin-specific protease tig00020918_g15884.t1 0.8907523787867913 15 Cpa|evm.model.tig00000863.17 Suppressor of mec-8 and unc-52 protein homolog 1 OS=Arabidopsis thaliana tig00000863_g4973.t1 0.8865091411256586 99 Cpa|evm.model.tig00020531.35 tig00020531_g10036.t2 0.8861585956229473 54 Cpa|evm.model.tig00020848.67 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.coat protein complex.cargo adaptor F-subcomplex.zeta subunit tig00020848_g14598.t1 0.8847488950456134 96 Cpa|evm.model.tig00001229.22 GPN-loop GTPase QQT1 OS=Arabidopsis thaliana tig00001229_g7856.t1 0.8812707809684239 26 Cpa|evm.model.tig00021357.28 Protein modification.phosphorylation.atypical kinase families.RIO kinase tig00021357_g20757.t1 0.8778249712396526 57 Cpa|evm.model.tig00000789.39 RNA biosynthesis.rRNA biogenesis.NOF1 control factor tig00000789_g4132.t1 0.8774559468362264 12 Cpa|evm.model.tig00000789.36 Protein translocation.nucleus.nucleocytoplasmic transport.RanBP1 GTPase activation accessory protein tig00000789_g4130.t1 0.8773673653296407 36 Cpa|evm.model.tig00020554.144 0.8762877774660017 38 Cpa|evm.model.tig00000842.2 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 OS=Arabidopsis thaliana tig00000842_g4821.t2 0.8761769817681442 85 Cpa|evm.model.tig00021464.27 tig00021464_g21733.t1 0.8737799832953672 81 Cpa|evm.model.tig00000037.6 tig00000037_g10073.t1 0.8730437727854017 83 Cpa|evm.model.tig00020909.35 Cytoskeleton.actin and tubulin folding.Prefoldin co-chaperone complex.PFD3 component tig00020909_g15357.t1 0.8719148844218425 61 Cpa|evm.model.tig00000829.17 Vesicle trafficking.Coat protein I (COPI) coatomer machinery.trafficking regulation.ERD2 K/HDEL-signature receptor tig00000829_g4659.t1 0.8710481773847946 67 Cpa|evm.model.tig00021234.15 RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.middle module.MED7 component tig00021234_g19389.t1 0.8707911916895394 22 Cpa|evm.model.tig00000704.54 Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana tig00000704_g3341.t1 0.8700957849341371 43 Cpa|evm.model.tig00020544.9 DNA repair protein UVH3 OS=Arabidopsis thaliana tig00020544_g10489.t1 0.8690383664350239 37 Cpa|evm.model.tig00000203.30 RNA processing.RNA splicing.spliceosome-associated non-snRNP MOS4-associated complex (MAC).associated components.Bud13 component tig00000203_g17137.t1 0.868777851292796 35 Cpa|evm.model.tig00000076.86 tig00000076_g2384.t1 0.8675260588587872 40 Cpa|evm.model.tig00000037.18 tig00020538_g10366.t1 0.8669871302895471 73 Cpa|evm.model.tig00000980.7 tig00000980_g6131.t1 0.8668283711392811 28 Cpa|evm.model.tig00020539.41 tig00020539_g10434.t1 0.8659274939437289 56 Cpa|evm.model.tig00000037.33 Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF3 mRNA-to-PIC binding complex.eIF3g component tig00000037_g10102.t1 0.8645827912041884 42 Cpa|evm.model.tig00020780.6 Protein degradation.peptide tagging.Small-Ubiquitin-like-Modifier (SUMO)-anchor modification (sumoylation).SUMO activating E1 complex.small component (SAE1) tig00020780_g13758.t1 0.8639137513386758 100 Cpa|evm.model.tig00001085.12 tig00001085_g6953.t1 0.8625277612264167 81 Cpa|evm.model.tig00000404.29 tig00000404_g392.t1 0.861213615740825 37 Cpa|evm.model.tig00020538.72 tig00020538_g10378.t1 0.8607970735040384 66 Cpa|evm.model.tig00020684.38 DEAD-box ATP-dependent RNA helicase 18 OS=Oryza sativa subsp. japonica tig00020684_g12886.t1 0.8602417473413845 51 Cpa|evm.model.tig00000217.42 Pre-mRNA-splicing factor SLU7-A OS=Arabidopsis thaliana tig00000217_g19173.t1 0.8594685545428113 89 Cpa|evm.model.tig00001085.3 RNA processing.RNA splicing.U2-type-intron-specific major spliceosome.U4/U6 small nuclear ribonucleoprotein particle (snRNP).NHP2L1/SNU13 snRNP component tig00001085_g6944.t1 0.8585864221746803 85 Cpa|evm.model.tig00000402.27 Vesicle trafficking.target membrane tethering.TRAPP (Trafficking-Protein-Particle) complexes.TRAPP-I/II/III complex-shared components.BET3 component tig00000402_g205.t1 0.8584392813980675 48 Cpa|evm.model.tig00020848.19 DNA-directed RNA polymerases II, IV and V subunit 3 OS=Arabidopsis thaliana tig00020848_g14546.t1 0.8584114185977002 84 Cpa|evm.model.tig00021589.5 Protein degradation.ER-associated protein degradation (ERAD) machinery.OS9 component tig00021589_g22710.t1 0.8579862253422089 47 Cpa|evm.model.tig00000704.61 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.TOZ assembly factor tig00000704_g3346.t2 0.8572704257997843 48 Cpa|evm.model.tig00001372.8 0.8565293732727389 85 Cpa|evm.model.tig00021612.34 tig00021612_g22877.t1 0.8562056144383393 68 Cpa|evm.model.tig00000704.26 tig00000704_g3315.t1 0.8541519190435828 54 Cpa|evm.model.tig00020554.145 U3 small nucleolar RNA-associated protein 18 homolog OS=Arabidopsis thaliana tig00020554_g10922.t1 0.8531868204272924 55 Cpa|evm.model.tig00000037.40 Solute transport.carrier-mediated transport.DMT superfamily.NST-TPT group.URGT/UXT nucleotide sugar transporter tig00000037_g10109.t1 0.8520909868057442 100 Cpa|evm.model.tig00020904.56 tig00020904_g15188.t1 0.8505016105869496 65 Cpa|evm.model.tig00000704.18 tig00000704_g3308.t1 0.848554092175739 66 Cpa|evm.model.tig00021312.50 Pre-mRNA splicing factor SR-like 1 OS=Arabidopsis thaliana tig00021312_g20084.t1 0.8483288653640496 67 Cpa|evm.model.tig00000217.34 tig00000217_g19168.t1 0.848013825208324 69 Cpa|evm.model.tig00021612.48 tig00021612_g22889.t1 0.847144293717708 72 Cpa|evm.model.tig00020510.74 Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU processome.Imp3 assembly factor tig00020510_g9856.t1 0.8469332009107022 74 Cpa|evm.model.tig00000203.32 RNA processing.messenger ribonucleoprotein particle (mRNP).mRNP remodeling.DBP5/LOS4 ATP-dependent helicase tig00000203_g17139.t1 0.8458176128983297 98 Cpa|evm.model.tig00021589.12 RNA biosynthesis.DNA-dependent RNA polymerase (Pol) complexes.regulatory subunits.subunit 6 tig00021589_g22717.t1 0.8457668384212342 80 Cpa|evm.model.tig00000829.26 Cell cycle.interphase.DNA replication.initiation.GINS DNA replication fork maintenance complex.PSF2 component tig00000829_g4667.t1 0.845355700518092 93 Cpa|evm.model.tig00021351.15 RNA processing.RNA quality control Exon Junction complex (EJC).core components.Y14 component tig00021352_g20674.t1 0.8450810887810991 91 Cpa|evm.model.tig00021319.34 tig00021319_g20228.t1 0.8450597437023898 86 Cpa|evm.model.tig00001029.14 tig00001029_g6412.t1 0.8450431836231834 95 Cpa|evm.model.tig00001229.19 tig00001229_g7852.t1 0.8429028327168326 92 Cpa|evm.model.tig00021254.24 Protein translocation.endoplasmic reticulum.co-translational insertion system.SRP (signal recognition particle) complex.SRP54 component tig00021254_g19703.t1 0.8427470179615284 84 Cpa|evm.model.tig00000704.42 tig00000704_g3329.t1 0.839890871235138 94 Cpa|evm.model.tig00021043.13 tig00021043_g17622.t1 0.8394347650355486 89 Cpa|evm.model.tig00000704.63 tig00000704_g3347.t1 0.8392683691988027 92 Cpa|evm.model.tig00000217.43 GPN-loop GTPase QQT1 OS=Arabidopsis thaliana tig00000217_g19174.t1 0.8392581818414513 91 Cpa|evm.model.tig00020531.48 RNA processing.RNA splicing.U6-associated LSm accessory ribonucleoprotein complex.LSm7 component tig00020531_g10054.t1 0.8368079081229312 96 Cpa|evm.model.tig00021682.8 Nuclear cap-binding protein subunit 2 OS=Oryza sativa subsp. japonica tig00021682_g23098.t1 0.8360405735233589 99